Pre_GI: BLASTP Hits

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Query: NC_006905:1961774:1982079 Salmonella enterica subsp. enterica serovar Choleraesuis str

Start: 1982079, End: 1982474, Length: 396

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain was isolated from a 58-year old man with sepsis and has been shown to be resistant to ciprofloxacin and ceftriaxone. This organism also causes severe disease (swine paratyphoid) in pigs. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011147:1057259:107024610702461070641396Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein9e-74275
NC_006511:1063249:107623610762361076631396Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCChypothetical protein9e-74275
NC_016831:1734292:175134517513451751740396Salmonella enterica subsp. enterica serovar Gallinarum/pullorumputative phage encoded DNA-binding protein1e-70264
NC_012125:1897611:191033019103301910647318Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein6e-58222
NC_003198:1867456:188720118872011887428228Salmonella enterica subsp. enterica serovar Typhi str. CT18,putative DNA-binding protein4e-38156
NC_004631:1091303:109370410937041093931228Salmonella enterica subsp. enterica serovar Typhi Ty2, completeputative DNA-binding protein4e-38156
NC_011294:1465500:147329514732951473624330Salmonella enterica subsp. enterica serovar Enteritidis strphage encoded DNA-binding protein1e-26118
NC_009801:1419324:142765314276531428048396Escherichia coli E24377A, complete genomehypothetical protein1e-22105
NC_003198:1908238:192130419213041921726423Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein4e-1786.7
NC_002695:1929215:193280619328061933228423Escherichia coli O157:H7 str. Sakai, complete genomehypothetical protein2e-1684.3
NC_002655:2142587:215393721539372154359423Escherichia coli O157:H7 EDL933, complete genomeunknown protein encoded within prophage CP-933R2e-1684.3
NC_008563:1475500:147842314784231478839417Escherichia coli APEC O1, complete genomehypothetical protein3e-1580.5
CP002185:1493280:151136715113671511789423Escherichia coli W, complete genomeconserved hypothetical protein5e-1579.7
CP002516:2580774:259406125940612594483423Escherichia coli KO11, complete genomeprotein of unknown function DUF9775e-1579.7
NC_016902:2580774:259406125940612594483423Escherichia coli KO11FL chromosome, complete genomehypothetical protein5e-1579.7
NC_010468:2265423:227185022718502272272423Escherichia coli ATCC 8739, complete genomeprotein of unknown function DUF9778e-1579
CU928160:1668842:168855816885581688980423Escherichia coli IAI1 chromosome, complete genomeconserved hypothetical protein from phage origin8e-1579
CP002185:1770815:179050217905021790924423Escherichia coli W, complete genomehypothetical protein8e-1579
CP002516:2305659:231493223149322315354423Escherichia coli KO11, complete genomeprotein of unknown function DUF9778e-1579
NC_011741:1668842:168855816885581688980423Escherichia coli IAI1 chromosome, complete genomehypothetical protein8e-1579
NC_016902:2305659:231493223149322315354423Escherichia coli KO11FL chromosome, complete genomehypothetical protein8e-1579
CU928145:1773642:179168517916851792110426Escherichia coli 55989 chromosome, complete genomeconserved hypothetical protein from phage origin8e-1579
NC_011748:1773642:179168517916851792110426Escherichia coli 55989, complete genomeconserved hypothetical protein from phage origin8e-1579
CU928145:1408280:141629014162901416712423Escherichia coli 55989 chromosome, complete genomeconserved hypothetical protein from phage origin8e-1579
NC_011748:1408280:141629014162901416712423Escherichia coli 55989, complete genomeconserved hypothetical protein from phage origin8e-1579
NC_011751:1859606:187787118778711878272402Escherichia coli UMN026 chromosome, complete genomehypothetical protein5e-1476.3
NC_011415:1472500:148676814867681487145378Escherichia coli SE11 chromosome, complete genomehypothetical protein1e-1065.1
NC_013361:2138716:215762221576222158041420Escherichia coli O26:H11 str. 11368 chromosome, complete genomeexclusion protein9e-0958.9