Pre_GI: BLASTP Hits

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Query: NC_006905:1509093:1529277 Salmonella enterica subsp. enterica serovar Choleraesuis str

Start: 1529277, End: 1529951, Length: 675

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain was isolated from a 58-year old man with sepsis and has been shown to be resistant to ciprofloxacin and ceftriaxone. This organism also causes severe disease (swine paratyphoid) in pigs. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012125:2360815:237393523739352374609675Salmonella enterica subsp. enterica serovar Paratyphi C strainpathogenicity island protein4e-130463
NC_011149:1710601:172372117237211724395675Salmonella enterica subsp. enterica serovar Agona str. SL483,type III secretion apparatus protein, HrpE/YscL family2e-127454
NC_003197:1471349:149158914915891492263675Salmonella typhimurium LT2, complete genometype III secretion system apparatus protein1e-126452
NC_011083:1476894:149710414971041497778675Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,type III secretion apparatus protein, HrpE/YscL family1e-126452
NC_016810:1428201:144844114484411449115675Salmonella enterica subsp. enterica serovar Typhimurium strputative pathogenicity island protein1e-126452
NC_016856:1481325:150156515015651502239675Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Stype III secretion system apparatus protein1e-126452
NC_016857:1428201:144844114484411449115675Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74type III secretion system apparatus protein1e-126452
NC_016860:1469066:148927614892761489950675Salmonella enterica subsp. enterica serovar Typhimurium strtype III secretion system apparatus protein1e-126452
NC_016863:1429516:144975614497561450430675Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1type III secretion system apparatus protein1e-126452
NC_004631:1325817:134599513459951346669675Salmonella enterica subsp. enterica serovar Typhi Ty2, completeputative pathogenicity island protein6e-127452
NC_003198:1621347:163446716344671635141675Salmonella enterica subsp. enterica serovar Typhi str. CT18,putative pathogenicity island protein6e-127452
NC_011205:1852665:186578518657851866459675Salmonella enterica subsp. enterica serovar Dublin str. CT_020218534e-126450
NC_011274:1763676:177679617767961777470675Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91pathogenicity island protein4e-126450
NC_011294:1723852:173697217369721737646675Salmonella enterica subsp. enterica serovar Enteritidis strpathogenicity island protein4e-126450
NC_011094:1435347:145549314554931456167675Salmonella enterica subsp. enterica serovar Schwarzengrund strtype III secretion apparatus protein, HrpE/YscL family protein5e-126449
NC_011080:1470794:149102914910291491703675Salmonella enterica subsp. enterica serovar Newport str. SL254,type III secretion apparatus protein, HrpE/YscL family2e-125448
NC_016831:1236786:125696212569621257636675Salmonella enterica subsp. enterica serovar Gallinarum/pullorumputative pathogenicity island protein5e-125446
NC_006511:1506915:152003515200351520709675Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCputative pathogenicity island protein1e-124445
NC_011147:1502096:151521615152161515890675Salmonella enterica subsp. enterica serovar Paratyphi A strpathogenicity island protein1e-124445
NC_016832:1324820:134510613451061345642537Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Secretion system apparatus protein ssaK2e-100364
NC_017046:1428272:144865014486501449186537Salmonella enterica subsp. enterica serovar Typhimurium str. 798pathogenicity island protein4e-100363
NC_010102:1616530:162965016296501630186537Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein2e-99361
NC_010067:1507823:152452015245201525194675Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein1e-98358