Pre_GI: BLASTP Hits

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Query: NC_006905:1342474:1350481 Salmonella enterica subsp. enterica serovar Choleraesuis str

Start: 1350481, End: 1350789, Length: 309

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain was isolated from a 58-year old man with sepsis and has been shown to be resistant to ciprofloxacin and ceftriaxone. This organism also causes severe disease (swine paratyphoid) in pigs. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009800:2049346:206290020629002063292393Escherichia coli HS, complete genomehypothetical protein9e-24108
NC_014121:1357339:137024413702441370564321Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completehypothetical protein1e-23108
NC_011283:4170369:418204941820494182369321Klebsiella pneumoniae 342 chromosome, complete genomehypothetical protein1e-22104
NC_015968:2845751:286317928631792863496318Enterobacter asburiae LF7a chromosome, complete genomehypothetical protein2e-22104
NC_015968:3277217:328520532852053285525321Enterobacter asburiae LF7a chromosome, complete genomehypothetical protein3e-22103
NC_009800:320115:332857332857333174318Escherichia coli HS, complete genomehypothetical protein1e-21102
NC_014838:254322:263187263187263510324Pantoea sp. At-9b plasmid pPAT9B01, complete sequencehypothetical protein6e-1269.3
NC_014306:3524980:353372535337253534045321Erwinia billingiae Eb661, complete genomeputative prophage repressor8e-1165.9
NC_014121:1682638:169113516911351691320186Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completehypothetical protein2e-0960.8
NC_013850:1887556:193656619365661936856291Klebsiella variicola At-22 chromosome, complete genomehypothetical protein9e-0855.8
NC_014837:1570500:1585521158552115866121092Pantoea sp. At-9b chromosome, complete genomeTerminase4e-0753.5
NC_015663:4735808:474481047448104745100291Enterobacter aerogenes KCTC 2190 chromosome, complete genomehypothetical protein7e-0752.8
NC_015663:4488058:450077545007754501065291Enterobacter aerogenes KCTC 2190 chromosome, complete genomehypothetical protein7e-0752.8
NC_021066:2197490:220532522053252205615291Raoultella ornithinolytica B6, complete genomehypothetical protein2e-0651.2