Pre_GI: BLASTP Hits

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Query: NC_006856:95830:101637 Salmonella enterica subsp. enterica serovar Choleraesuis str

Start: 101637, End: 103028, Length: 1392

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain was isolated from a 58-year old man with sepsis and has been shown to be resistant to ciprofloxacin and ceftriaxone. This organism also causes severe disease (swine paratyphoid) in pigs. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_006856:95830:1014991014991030281530Salmonella enterica subsp. enterica serovar Choleraesuis strhypothetical protein0959
NC_018678:554675:5609415609415624911551Alteromonas macleodii str. 'English Channel 673' chromosome,hypothetical protein0673
NC_015633:2919501:2933015293301529346431629Vibrio anguillarum 775 chromosome chromosome I, complete sequencehypothetical protein6e-138491
NC_012668:2258854:2264628226462822662531626Vibrio cholerae MJ-1236 chromosome 1, complete sequencehypothetical protein5e-137488
NC_012668:1688500:1747460174746017490851626Vibrio cholerae MJ-1236 chromosome 1, complete sequencehypothetical protein5e-137488
NC_012668:1623350:1627857162785716294821626Vibrio cholerae MJ-1236 chromosome 1, complete sequencehypothetical protein5e-137488
NC_012668:160357:1829891829891846141626Vibrio cholerae MJ-1236 chromosome 1, complete sequencehypothetical protein5e-137488
NC_014541:4167916:4172501417250141740631563Ferrimonas balearica DSM 9799 chromosome, complete genomeintegrase family protein1e-115417
NC_014541:1753776:1770216177021617716521437Ferrimonas balearica DSM 9799 chromosome, complete genomehypothetical protein1e-25118
NC_011663:5016488:5022344502234450236811338Shewanella baltica OS223 chromosome, complete genomeintegrase family protein2e-22107
NC_016445:2593800:2613434261343426146361203Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completehypothetical protein1e-1584.7
NC_012668:442601:4496064496064508201215Vibrio cholerae MJ-1236 chromosome 1, complete sequencehypothetical protein1e-1584.3
NC_002505:168532:1881661881661893801215Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completetransposase, putative1e-1584.3
NC_015633:338000:3508423508423520561215Vibrio anguillarum 775 chromosome chromosome I, complete sequencetransposase3e-1583.2
NC_016944:168530:1881641881641893781215Vibrio cholerae IEC224 chromosome I, complete sequencehypothetical protein8e-1478.6
NC_016901:5130147:5135620513562051369451326Shewanella baltica OS678 chromosome, complete genomeintegrase family protein4e-1376.6
NC_009665:5072413:5077871507787150791961326Shewanella baltica OS185 chromosome, complete genomephage integrase family protein4e-1376.6
NC_009997:5188221:5193694519369451950191326Shewanella baltica OS195, complete genomeintegrase family protein4e-1376.6
NC_015554:4724245:4730477473047747317691293Alteromonas sp. SN2 chromosome, complete genomebacteriophage integrase/recombinase2e-1170.5