Pre_GI: BLASTP Hits

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Query: NC_006511:3079512:3089941 Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC

Start: 3089941, End: 3090126, Length: 186

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This serovar has a narrow host range and causes a typhoid-like (paratyphoid fever) illness in humans. It is especially prevalent in southern and eastern Asia, and has been associated with some particularly virulent outbreaks. A number of isolates are increasingly antibiotic resistant. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011147:3075186:308561530856153085800186Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein7e-30129
NC_004631:3112043:312246131224613122646186Salmonella enterica subsp. enterica serovar Typhi Ty2, completehypothetical protein4e-29126
NC_003198:3126548:313696631369663137151186Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein4e-29126
NC_017033:2081206:208638120863812087217837Frateuria aurantia DSM 6220 chromosome, complete genomehypothetical protein3e-0650.4