Pre_GI: BLASTP Hits

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Query: NC_006511:2467763:2477948 Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC

Start: 2477948, End: 2478448, Length: 501

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This serovar has a narrow host range and causes a typhoid-like (paratyphoid fever) illness in humans. It is especially prevalent in southern and eastern Asia, and has been associated with some particularly virulent outbreaks. A number of isolates are increasingly antibiotic resistant. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016831:2627515:263776726377672638267501Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein3e-79293
NC_011294:346915:365614365614366114501Salmonella enterica subsp. enterica serovar Enteritidis strexported protein3e-79293
NC_011147:2463299:247348424734842473984501Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein3e-79293
NC_011083:403022:433437433437433937501Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,3e-79293
NC_011080:383441:390770390770391270501Salmonella enterica subsp. enterica serovar Newport str. SL254,3e-79293
NC_010102:2721374:273162827316282732128501Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein3e-79293
NC_011094:380428:399080399080399580501Salmonella enterica subsp. enterica serovar Schwarzengrund strhypothetical protein8e-79292
NC_011149:361765:369094369094369594501Salmonella enterica subsp. enterica serovar Agona str. SL483,5e-79292
NC_017046:366905:385791385791386291501Salmonella enterica subsp. enterica serovar Typhimurium str. 798hypothetical protein1e-78291
NC_016863:367404:386290386290386790501Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1hypothetical protein1e-78291
NC_016856:365665:387001387001387501501Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Shypothetical protein1e-78291
NC_016810:366908:385794385794386294501Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein1e-78291
NC_012125:373630:380959380959381459501Salmonella enterica subsp. enterica serovar Paratyphi C strainperiplasmic protein1e-78291
NC_006905:401154:430849430849431349501Salmonella enterica subsp. enterica serovar Choleraesuis strputative periplasmic protein1e-78291
NC_004631:2584244:259444025944402594769330Salmonella enterica subsp. enterica serovar Typhi Ty2, completehypothetical protein4e-41166
NC_003198:378844:386344386344386673330Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein4e-41166
NC_016832:2581145:259134125913412591544204Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein2e-32137
NC_011094:380428:402283402283402771489Salmonella enterica subsp. enterica serovar Schwarzengrund strhypothetical protein3e-31134
NC_010102:2721374:272844827284482728936489Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein3e-31134
NC_011274:376970:387488387488387976489Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91hypothetical protein5e-31133
NC_016831:2627515:263458726345872635075489Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein5e-31133
NC_011149:361765:372295372295372783489Salmonella enterica subsp. enterica serovar Agona str. SL483,putative inner membrane protein1e-30132
NC_011080:383441:393960393960394448489Salmonella enterica subsp. enterica serovar Newport str. SL254,putative inner membrane protein1e-30132
NC_011083:403022:436627436627437115489Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,putative inner membrane protein1e-30132
NC_011147:2463299:247030424703042470792489Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein9e-31132
NC_006511:2467763:247470724747072475256550Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC9e-31132
NC_003197:367430:386310386310386609300Salmonella typhimurium LT2, complete genomeputative periplasmic protein7e-31132
NC_012125:373630:384149384149384637489Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein1e-29129
NC_016832:2581145:258809125880912588639549Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein2e-24111
NC_003198:378844:389375389375389923549Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein2e-24111
NC_004631:2584244:259119025911902591738549Salmonella enterica subsp. enterica serovar Typhi Ty2, completehypothetical protein2e-24111