Pre_GI: BLASTP Hits

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Query: NC_006361:5546232:5549367 Nocardia farcinica IFM 10152, complete genome

Start: 5549367, End: 5550938, Length: 1572

Host Lineage: Nocardia farcinica; Nocardia; Nocardiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This type strain was isolated from the bronchus of a male Japanese patient. Opportunistic human pathogen. This genus was originally described from specimens isolated by plating soil suspensions on diagnostic sensitivity test plates augmented with antifungal agents. Organisms in this genus cause opportunistic human pulmonary and systemic nocardiosis. This can complicate existing debilitating conditions such as leukemia, lymphoma, or other neoplasms, or illnesses in patients with compromised immune systems.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013131:1593840:1622309162230916238921584Catenulispora acidiphila DSM 44928, complete genomeDNA ligase I, ATP-dependent Dnl15e-110398
NC_011529:1375920:1390140139014013918281689Thermococcus onnurineus NA1, complete genomethermostable DNA ligase6e-70265
NC_013849:19404:1940419404210711668Ferroglobus placidus DSM 10642 chromosome, complete genomeDNA ligase I, ATP-dependent Dnl15e-69262
NC_000868:500249:5140035140035156821680Pyrococcus abyssi GE5, complete genomeDNA ligase8e-69261
NC_019977:1649546:1671185167118516728701686Methanomethylovorans hollandica DSM 15978, complete genomeATP-dependent DNA ligase I2e-67256
NC_003413:1521080:1525737152573715274221686Pyrococcus furiosus DSM 3638, complete genomeDNA ligase2e-66253
NC_000917:532500:5600425600425617121671Archaeoglobus fulgidus DSM 4304, complete genomeDNA ligase (lig)1e-63244
NC_015320:470988:5005855005855022551671Archaeoglobus veneficus SNP6 chromosome, complete genomeDNA ligase5e-62239
NC_009464:300422:3044383044383061441707Uncultured methanogenic archaeon RC-I, complete genomeATP-dependent DNA ligase8e-56218
NC_014222:186876:2024822024822042751794Methanococcus voltae A3 chromosome, complete genomeDNA ligase I, ATP-dependent Dnl12e-50200
NC_009975:1565865:1583851158385115855721722Methanococcus maripaludis C6, complete genomeDNA ligase I, ATP-dependent Dnl13e-47190
NC_016645:1909507:1928088192808819297791692Pyrobaculum sp. 1860 chromosome, complete genomeDNA ligase3e-43176
NC_014820:1057826:1077557107755710792901734Cenarchaeum symbiosum A, complete genomeATP-dependent DNA ligase1e-42174
NC_009515:616432:6257866257866274411656Methanobrevibacter smithii ATCC 35061, complete genomeATP-dependent DNA ligase, Cdc96e-42172
NC_016885:2091918:2091918209191820936721755Pyrobaculum oguniense TE7 chromosome, complete genomeDNA ligase I4e-41169
NC_009440:79263:1211851211851229811797Metallosphaera sedula DSM 5348 chromosome, complete genomeATP-dependent DNA ligase7e-41168
NC_017954:1:24924920511803Thermogladius cellulolyticus 1633 chromosome, complete genomeATP-dependent DNA ligase7e-38159
NC_020389:1936000:1947325194732519490641740Methanosarcina mazei Tuc01, complete genomeATP-dependent DNA ligase4e-37156
NC_014374:1072218:1177223117722311790461824Acidilobus saccharovorans 345-15 chromosome, complete genomeATP-dependent DNA ligase9e-35148
NC_008095:7499255:7517372751737275189671596Myxococcus xanthus DK 1622, complete genomeDNA ligase, ATP-dependent6e-31135
NC_005877:665092:6908376908376926091773Picrophilus torridus DSM 9790, complete genomeDNA ligase2e-29130
NC_014148:4037357:4055204405520440569581755Planctomyces limnophilus DSM 3776 chromosome, complete genomeATP dependent DNA ligase1e-26121
NC_009952:2752500:2754445275444527560491605Dinoroseobacter shibae DFL 12, complete genomeDNA ligase3e-23110
NC_015723:1998363:1996693199669319983661674Cupriavidus necator N-1 chromosome 2, complete sequenceDNA ligase Lig2e-23110
NC_015416:2723189:274416427441642745111948Methanosaeta concilii GP-6 chromosome, complete genomeDNA polymerase LigD1e-21105
NC_009439:2427120:2427120242712024287781659Pseudomonas mendocina ymp, complete genomeATP-dependent DNA ligase9e-2099
NC_007513:987969:1005424100542410070881665Synechococcus sp. CC9902, complete genomeDNA ligase9e-2098.6
NC_014923:79370:7937079370809711602Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome, completeATP dependent DNA ligase1e-1895.1
NC_008319:1306482:1315066131506613167631698Synechococcus sp. CC9311, complete genomepossible ATP-dependent DNA ligase1e-1895.1
NC_015573:997629:101154910115491012505957Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomeDNA polymerase LigD, ligase domain-containing protein1e-1688.6
NC_014811:166389:185636185636186622987Mycobacterium sp. Spyr1 plasmid pMSPYR101, complete sequenceDNA polymerase LigD-like ligase domain-containing protein1e-1378.6
NC_019673:4687289:4694814469481446962921479Saccharothrix espanaensis DSM 44229 complete genomeputative DNA ligase1e-1378.2
NC_007722:851129:8511298511298536482520Erythrobacter litoralis HTCC2594, complete genomehypothetical protein2e-1378.2
NC_009485:8138314:8168179816817981692341056Bradyrhizobium sp. BTAi1 chromosome, complete genomeATP-dependent DNA ligase2e-1274.7
NC_015136:2021799:2024715202471520266731959Burkholderia sp. CCGE1001 chromosome 1, complete sequenceDNA ligase D9e-1168.9
NC_007508:2941889:2945662294566229482802619Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomeATP-dependent DNA ligase8e-1168.9
NC_008271:140846:140846140846141817972Rhodococcus sp. RHA1 plasmid pRHL3, complete sequenceATP-dependent DNA ligase2e-0964.7
NC_017955:3670670:3671121367112136721941074Modestobacter marinus, complete genomeATP-dependent DNA ligase6e-0962.8
NC_015138:3022414:3039612303961230424222811Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completeDNA ligase D8e-0962.4
NC_015675:4442000:446120844612084462071864Mesorhizobium opportunistum WSM2075 chromosome, complete genomeATP dependent DNA ligase1e-0861.6
NC_014830:3870000:3891964389196438933641401Intrasporangium calvum DSM 43043 chromosome, complete genomeATP dependent DNA ligase4e-0860.1
NC_014923:3930669:394222939422293943092864Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome, completeATP dependent DNA ligase5e-0859.7
NC_011071:10842:3104831048335252478Stenotrophomonas maltophilia R551-3, complete genomeDNA ligase D2e-0757.8
NC_008782:2683989:2685104268510426876172514Acidovorax sp. JS42, complete genomeDNA ligase (ATP)4e-0756.6
NC_014923:4017575:402602940260294026889861Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome, completeATP dependent DNA ligase1e-0655.5