Pre_GI: BLASTP Hits

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Query: NC_006361:498305:504157 Nocardia farcinica IFM 10152, complete genome

Start: 504157, End: 504795, Length: 639

Host Lineage: Nocardia farcinica; Nocardia; Nocardiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This type strain was isolated from the bronchus of a male Japanese patient. Opportunistic human pathogen. This genus was originally described from specimens isolated by plating soil suspensions on diagnostic sensitivity test plates augmented with antifungal agents. Organisms in this genus cause opportunistic human pulmonary and systemic nocardiosis. This can complicate existing debilitating conditions such as leukemia, lymphoma, or other neoplasms, or illnesses in patients with compromised immune systems.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010612:6113155:612666161266616127263603Mycobacterium marinum M, complete genometranscriptional regulatory protein (probably TetR-family)2e-51202
NC_020133:5710661:572194157219415722498558Mycobacterium liflandii 128FXT, complete genomeTetR family transcriptional regulator3e-51201
NC_008699:2916752:293651429365142937146633Nocardioides sp. JS614, complete genomeregulatory protein, TetR5e-49194
NC_016114:5539021:554076355407635541380618Streptomyces flavogriseus ATCC 33331 chromosome, complete genomeTetR family transcriptional regulator4e-36151
NC_014831:1818968:182454118245411825230690Thermaerobacter marianensis DSM 12885 chromosome, complete genometranscriptional regulator, TetR family3e-1582
NC_016023:1083826:110000311000031100566564Bacillus coagulans 36D1 chromosome, complete genomeTetR family transcriptional regulator2e-1375.5
NC_007794:1504449:151167815116781512337660Novosphingobium aromaticivorans DSM 12444, complete genometranscriptional regulator, TetR family3e-1271.6
NC_007953:314872:334745334745335404660Burkholderia xenovorans LB400 chromosome 3, complete sequenceTranscriptional regulator, TetR family5e-1270.9
NC_013205:854983:879742879742880350609Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446,transcriptional regulator, TetR family3e-1168.6
NC_004193:701622:715262715262715828567Oceanobacillus iheyensis HTE831, complete genometranscriptional regulator6e-1167.4
NC_008699:833737:853126853126853728603Nocardioides sp. JS614, complete genomeregulatory protein, TetR2e-0962.4
NC_019673:1988853:199991619999162000491576Saccharothrix espanaensis DSM 44229 complete genomeTranscriptional regulator, TetR family6e-0960.8
NC_015594:160848:165046165046165639594Sphingobium chlorophenolicum L-1 chromosome chromosome 2, completeregulatory protein TetR2e-0859.3
NC_010623:1871492:188609818860981886784687Burkholderia phymatum STM815 chromosome 2, complete sequencetranscriptional regulator, TetR family2e-0858.9
NC_018524:1279156:129739812973981297970573Nocardiopsis alba ATCC BAA-2165 chromosome, complete genomeputative transcriptional regulator8e-0857.4
NC_014830:3438504:347522834752283475842615Intrasporangium calvum DSM 43043 chromosome, complete genometranscriptional regulator, TetR family1e-0756.6
NC_014666:5449884:5451174545117454524571284Frankia sp. EuI1c chromosome, complete genomeregulatory protein TetR2e-0755.8
NC_008740:443274:492649492649493263615Marinobacter aquaeolei VT8, complete genometranscriptional regulator, TetR family3e-0755.1
NC_014758:310394:344457344457345041585Calditerrivibrio nitroreducens DSM 19672 chromosome, completetranscriptional regulator, tetr family5e-0754.3
NC_015563:2656628:268139926813992682013615Delftia sp. Cs1-4 chromosome, complete genomeregulatory protein TetR1e-0653.1
NC_009077:4810379:482799648279964828661666Mycobacterium sp. JLS, complete genometranscriptional regulator, TetR family1e-0653.1
NC_008268:5745620:575548057554805756157678Rhodococcus sp. RHA1, complete genometranscriptional regulator, TetR family2e-0652.8
NC_010410:480518:495244495244495891648Acinetobacter baumannii AYE, complete genomeputative transcriptional regulator (TetR family)4e-0651.2
NC_010611:3413333:341784934178493418448600Acinetobacter baumannii ACICU, complete genomeTranscriptional regulator5e-0651.2