Pre_GI: BLASTP Hits

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Query: NC_006361:3132000:3152270 Nocardia farcinica IFM 10152, complete genome

Start: 3152270, End: 3153073, Length: 804

Host Lineage: Nocardia farcinica; Nocardia; Nocardiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This type strain was isolated from the bronchus of a male Japanese patient. Opportunistic human pathogen. This genus was originally described from specimens isolated by plating soil suspensions on diagnostic sensitivity test plates augmented with antifungal agents. Organisms in this genus cause opportunistic human pulmonary and systemic nocardiosis. This can complicate existing debilitating conditions such as leukemia, lymphoma, or other neoplasms, or illnesses in patients with compromised immune systems.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014158:73344:920449204492703660Tsukamurella paurometabola DSM 20162 chromosome, complete genometranscriptional regulator, TetR family3e-1582.8
NC_015064:1355065:135624413562441356900657Acidobacterium sp. MP5ACTX9 chromosome, complete genomeregulatory protein TetR8e-0754.3
NC_017904:2353800:237136823713682371985618Mycobacterium sp. MOTT36Y chromosome, complete genomeTetR family transcriptional regulator4e-0652
NC_009664:4347718:435952443595244360177654Kineococcus radiotolerans SRS30216, complete genometranscriptional regulator, TetR family1e-0550.8