Pre_GI: BLASTP Hits

Some Help

Query: NC_006361:3047788:3056083 Nocardia farcinica IFM 10152, complete genome

Start: 3056083, End: 3057516, Length: 1434

Host Lineage: Nocardia farcinica; Nocardia; Nocardiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This type strain was isolated from the bronchus of a male Japanese patient. Opportunistic human pathogen. This genus was originally described from specimens isolated by plating soil suspensions on diagnostic sensitivity test plates augmented with antifungal agents. Organisms in this genus cause opportunistic human pulmonary and systemic nocardiosis. This can complicate existing debilitating conditions such as leukemia, lymphoma, or other neoplasms, or illnesses in patients with compromised immune systems.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016887:3286436:3321039332103933244823444Nocardia cyriacigeorgica GUH-2, complete genomerestriction-modification system endonuclease1e-89330
NC_006361:2920028:2929350292935029327933444Nocardia farcinica IFM 10152, complete genomeputative restriction-modification system endonuclease1e-86320
NC_009338:817854:8251378251378285503414Mycobacterium gilvum PYR-GCK chromosome, complete genometype III restriction enzyme, res subunit2e-36153
NC_007908:1108494:1131262113126211346783417Rhodoferax ferrireducens T118, complete genometype III restriction enzyme, res subunit2e-34147
NC_008358:2638245:2689150268915026925543405Hyphomonas neptunium ATCC 15444, complete genometype I restriction-modification system, R subunit3e-32140
NC_009925:647752:6582026582026616093408Acaryochloris marina MBIC11017, complete genometype I restriction enzyme R protein9e-28125
NC_016027:1902854:1928603192860319319983396Gluconacetobacter xylinus NBRC 3288, complete genometype III restriction enzyme, res subunit1e-27124
NC_008312:3728329:3736248373624837396073360Trichodesmium erythraeum IMS101, complete genometype III restriction enzyme, res subunit1e-25118
NC_015953:3227000:3232508323250832359693462Streptomyces sp. SirexAA-E chromosome, complete genomeType I site-specific deoxyribonuclease2e-25117
NC_019902:1061432:109591610959161096872957Thioalkalivibrio nitratireducens DSM 14787, complete genomeType I restriction-modification system, restriction subunit R4e-24113
NC_007645:5160133:5178827517882751823843558Hahella chejuensis KCTC 2396, complete genomeType I site-specific restriction-modification system, R (restriction) subunit and related helicase5e-23109
NC_011138:3881446:3895467389546738988923426Alteromonas macleodii 'Deep ecotype', complete genomeType I site-specific restriction-modification system, R (restriction) subunit and related helicase1e-21105
NC_014640:6815264:6820902682090268243573456Achromobacter xylosoxidans A8 chromosome, complete genometype III restriction enzyme, Res subunit1e-1998.2
NC_015737:449914:4573824573824607593378Clostridium sp. SY8519, complete genomehypothetical protein9e-1892
NC_017068:2055500:2059346205934620626783333Selenomonas ruminantium subsp. lactilytica TAM6421, completeputative type I restriction-modification system R subunit3e-1790.1
NC_006510:372826:3812573812573845953339Geobacillus kaustophilus HTA426, complete genometype I restriction-modification system R subunit (endonuclease)4e-1789.7
NC_016593:416661:4237054237054270493345Geobacillus thermoleovorans CCB_US3_UF5 chromosome, completetype I restriction-modification system R subunit4e-1789.7
NC_014643:2056280:2059221205922120626463426Rothia dentocariosa ATCC 17931 chromosome, complete genometype I restriction-modification system R subunit1e-1688.2
NC_014206:411143:4187894187894221303342Geobacillus sp. C56-T3 chromosome, complete genometype I site-specific deoxyribonuclease4e-1686.3
NC_015576:1442713:145046114504611450781321Mycobacterium sp. JDM601 chromosome, complete genometype III restriction enzyme res subunit8e-1479
NC_015945:1908895:1922906192290619263913486Muricauda ruestringensis DSM 13258 chromosome, complete genomeType I site-specific deoxyribonuclease6e-1375.9
NC_013406:1217385:1238848123884812422013354Paenibacillus sp. Y412MC10 chromosome, complete genometype III restriction protein res subunit2e-1170.9
NC_013203:202008:2336162336162369933378Atopobium parvulum DSM 20469, complete genometype III restriction protein res subunit6e-1065.9
NC_012917:3241196:3255289325528932587023414Pectobacterium carotovorum subsp. carotovorum PC1, complete genometype III restriction protein res subunit7e-1065.9
NC_011083:4547825:4593159459315945965723414Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,type III restriction enzyme, res subunit2e-0963.9
NC_020211:554736:5749865749865783993414Serratia marcescens WW4, complete genomeendonuclease R Type I restriction enzyme3e-0963.5
NC_016612:2009927:2035784203578420391973414Klebsiella oxytoca KCTC 1686 chromosome, complete genometype III restriction enzyme, res subunit3e-0963.5
CP002185:4750571:4763293476329347667063414Escherichia coli W, complete genometype III restriction enzyme, res subunit5e-0962.8
CP002516:4236680:4246163424616342495763414Escherichia coli KO11, complete genometype III restriction protein res subunit5e-0962.8
NC_016902:4236680:4246163424616342495763414Escherichia coli KO11FL chromosome, complete genometype III restriction protein res subunit5e-0962.8
NC_008346:584305:6103396103396136863348Syntrophomonas wolfei subsp. wolfei str. Goettingen, completetype I restriction-modification system R subunit (endonuclease)2e-0860.8
NC_011071:1178423:1182895118289511862753381Stenotrophomonas maltophilia R551-3, complete genometype III restriction protein res subunit3e-0860.1
NC_019897:3613830:3635423363542336387763354Thermobacillus composti KWC4 chromosome, complete genomehelicase, type I site-specific restriction-modification system restriction subunit5e-0859.7
NC_012962:4591295:4591295459129545947083414Photorhabdus asymbiotica, complete genomehypothetical protein7e-0859.3
NC_016803:1646342:1663058166305816658682811Desulfovibrio desulfuricans ND132 chromosome, complete genomeType I site-specific deoxyribonuclease7e-0859.3
NC_015578:3495034:3504553350455335079483396Treponema primitia ZAS-2 chromosome, complete genometype I restriction-modification system R subunit4e-0756.6
NC_012108:1664341:1683995168399516873933399Desulfobacterium autotrophicum HRM2, complete genomeHsdR18e-0755.5