Pre_GI: BLASTP Hits

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Query: NC_005363:2172444:2179983 Bdellovibrio bacteriovorus HD100, complete genome

Start: 2179983, End: 2180279, Length: 297

Host Lineage: Bdellovibrio bacteriovorus; Bdellovibrio; Bdellovibrionaceae; Bdellovibrionales; Proteobacteria; Bacteria

General Information: This organism is unique in that it is a bacteriolytic microbe that preys on other gram negative bacteria. It is found throughout soil, sewage, and aquatic environments, and is often associated with biofilms. This organism has a biphasic lifestyle which consists of a free living and motile phase, and an attack phase where the bacterium attaches to a host cell, burrows into the periplasm, and begins to degrade the host from the inside out. The organism sheds its flagellum once it makes irreversible contact with the host, and when it is inside, begins to form a bdelloplast, resulting in degradation of the host cell inner membrane and alteration of its peptidoglycan layer, resulting in a spherical cell. The Bdellovibrio cell elongates until it forms a long coiled structure which then divides, forming many flagellated progeny which continue the degradation of the host cell to propagate the life cycle. The genome encodes a large number of degradative and lytic enzymes which are used to degrade the host organism. The organism has numerous deficiencies in its amino acid biosynthetic pathways, suggesting it utilizes prey metabolites for protein synthesis.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014225:1403007:141618214161821416517336Waddlia chondrophila WSU 86-1044 chromosome, complete genomemultiple resistance and pH homeostasis system, subunit C4e-1063.5
NC_019903:134169:143829143829144167339Desulfitobacterium dichloroeliminans LMG P-21439 chromosome,multisubunit Na+/H+ antiporter subunit MnhC2e-0858.2
NC_006322:3198829:320165932016593202000342Bacillus licheniformis ATCC 14580, complete genomehypothetical protein1e-0755.5
NC_011059:65414:956789567896046369Prosthecochloris aestuarii DSM 271, complete genomeNADH-ubiquinone oxidoreductase chain 4L2e-0754.7
NC_008260:2992813:300162430016243001962339Alcanivorax borkumensis SK2, complete genomeMnhC, multicomponent Na+/H+ antiporter, subunit C3e-0753.9
NC_016642:2573481:258415425841542584531378Pseudovibrio sp. FO-BEG1 chromosome, complete genomemonovalent cation/H+ antiporter subunit C4e-0753.5
NC_013169:513327:512848512848513330483Kytococcus sedentarius DSM 20547, complete genomemultisubunit Na+/H+ antiporter, MnhC subunit4e-0753.5
NC_019940:1963000:198155819815581981911354Thioflavicoccus mobilis 8321 chromosome, complete genomemultisubunit Na+/H+ antiporter subunit MnhC7e-0752.8
NC_016041:2420098:243079024307902431155366Glaciecola nitratireducens FR1064 chromosome, complete genomeputative monovalent cation/H+ antiporter subunit C7e-0752.8
NC_018524:2423016:244845024484502448758309Nocardiopsis alba ATCC BAA-2165 chromosome, complete genomeNADH-ubiquinone/plastoquinone oxidoreductase chain 4L family protein7e-0752.8
NC_016603:3475843:348786634878663488234369Acinetobacter calcoaceticus PHEA-2 chromosome, complete genomeputative monovalent cation/H+ antiporter subunit C8e-0752.4
NC_012704:2347969:235096523509652351543579Corynebacterium kroppenstedtii DSM 44385, complete genomeNa(+)/H(+) antiporter subunit1e-0652.4
NC_015276:565701:574891574891575259369Marinomonas mediterranea MMB-1 chromosome, complete genomeNADH-ubiquinone oxidoreductase chain 4L3e-0650.4
NC_015914:3317029:333996833399683340321354Cyclobacterium marinum DSM 745 chromosome, complete genomeNADH-ubiquinone oxidoreductase chain 4L6e-0649.7