Pre_GI: BLASTP Hits

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Query: NC_005363:1604337:1643615 Bdellovibrio bacteriovorus HD100, complete genome

Start: 1643615, End: 1644037, Length: 423

Host Lineage: Bdellovibrio bacteriovorus; Bdellovibrio; Bdellovibrionaceae; Bdellovibrionales; Proteobacteria; Bacteria

General Information: This organism is unique in that it is a bacteriolytic microbe that preys on other gram negative bacteria. It is found throughout soil, sewage, and aquatic environments, and is often associated with biofilms. This organism has a biphasic lifestyle which consists of a free living and motile phase, and an attack phase where the bacterium attaches to a host cell, burrows into the periplasm, and begins to degrade the host from the inside out. The organism sheds its flagellum once it makes irreversible contact with the host, and when it is inside, begins to form a bdelloplast, resulting in degradation of the host cell inner membrane and alteration of its peptidoglycan layer, resulting in a spherical cell. The Bdellovibrio cell elongates until it forms a long coiled structure which then divides, forming many flagellated progeny which continue the degradation of the host cell to propagate the life cycle. The genome encodes a large number of degradative and lytic enzymes which are used to degrade the host organism. The organism has numerous deficiencies in its amino acid biosynthetic pathways, suggesting it utilizes prey metabolites for protein synthesis.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013730:834500:866229866229866738510Spirosoma linguale DSM 74, complete genomeprotein of unknown function DUF2967e-27119
NC_007775:1153631:1174189117418911760541866Synechococcus sp. JA-3-3Ab, complete genomeUDP-N-acetylglucosamine pyrophosphorylase2e-24111
NC_015574:2221220:223499422349942235371378Methanobacterium sp. SWAN-1 chromosome, complete genomehypothetical protein1e-21102
NC_004605:1092476:111117011111701111574405Vibrio parahaemolyticus RIMD 2210633 chromosome II, completehypothetical protein4e-21100
NC_008319:1574908:158191815819181582550633Synechococcus sp. CC9311, complete genomeProtein containing glutaredoxin domain and PD1-like DNA-binding domain7e-0959.3