Pre_GI: BLASTP Hits

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Query: NC_005363:1604337:1624303 Bdellovibrio bacteriovorus HD100, complete genome

Start: 1624303, End: 1625571, Length: 1269

Host Lineage: Bdellovibrio bacteriovorus; Bdellovibrio; Bdellovibrionaceae; Bdellovibrionales; Proteobacteria; Bacteria

General Information: This organism is unique in that it is a bacteriolytic microbe that preys on other gram negative bacteria. It is found throughout soil, sewage, and aquatic environments, and is often associated with biofilms. This organism has a biphasic lifestyle which consists of a free living and motile phase, and an attack phase where the bacterium attaches to a host cell, burrows into the periplasm, and begins to degrade the host from the inside out. The organism sheds its flagellum once it makes irreversible contact with the host, and when it is inside, begins to form a bdelloplast, resulting in degradation of the host cell inner membrane and alteration of its peptidoglycan layer, resulting in a spherical cell. The Bdellovibrio cell elongates until it forms a long coiled structure which then divides, forming many flagellated progeny which continue the degradation of the host cell to propagate the life cycle. The genome encodes a large number of degradative and lytic enzymes which are used to degrade the host organism. The organism has numerous deficiencies in its amino acid biosynthetic pathways, suggesting it utilizes prey metabolites for protein synthesis.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012779:1286500:1310588131058813118621275Edwardsiella ictaluri 93-146, complete genomeLsg1e-55217
NC_013508:1289159:1314102131410213153671266Edwardsiella tarda EIB202, complete genomeputative polysaccharide biosynthesis protein CpsL3e-55216
NC_013173:3679326:3689094368909436903501257Desulfomicrobium baculatum DSM 4028, complete genomepolysaccharide biosynthesis protein2e-40167
NC_014624:2478985:2483983248398324853981416Eubacterium limosum KIST612 chromosome, complete genomepolysaccharide biosynthesis protein2e-1687.4
NC_005085:4335333:4352230435223043534891260Chromobacterium violaceum ATCC 12472, complete genomeprobable lipopolysaccharide biosynthesis protein2e-1687
NC_014121:3399685:3417359341735934185641206Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completelipopolysaccharide biosynthesis protein4e-1686.3
NC_011753:206178:2178382178382191361299Vibrio splendidus LGP32 chromosome 1, complete genomeputative capsular polysaccharide repeating unit transporter CpsL2e-1480.9
NC_016818:3851542:3863401386340138646181218Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completemembrane protein1e-1378.2
NC_013282:2827757:284255528425552843481927Cronobacter turicensis, complete genomehypothetical protein5e-1375.9
NC_009767:997500:1010446101044610119121467Roseiflexus castenholzii DSM 13941, complete genomepolysaccharide biosynthesis protein2e-1273.6
NC_007645:5397526:5410188541018854114291242Hahella chejuensis KCTC 2396, complete genomepolysaccharide biosynthesis protein4e-1272.8
NC_017047:3907854:3919068391906839202851218Rahnella aquatilis HX2 chromosome, complete genomepolysaccharide biosynthesis protein1e-1171.6
NC_015061:3840463:3851677385167738528941218Rahnella sp. Y9602 chromosome, complete genomepolysaccharide biosynthesis protein1e-1171.6
NC_013421:3279499:3294544329454432957641221Pectobacterium wasabiae WPP163, complete genomepolysaccharide biosynthesis protein1e-1171.2
NC_016631:1757788:1759741175974117612701530Granulicella mallensis MP5ACTX8 chromosome, complete genomepolysaccharide biosynthesis protein2e-1067.4
NC_002663:564958:5811755811755823741200Pasteurella multocida subsp. multocida str. Pm70, complete genomehypothetical protein2e-1067
NC_017027:542500:5657335657335669321200Pasteurella multocida subsp. multocida str. HN06 chromosome,hypothetical protein3e-1066.6
NC_009338:5052000:5076332507633250777621431Mycobacterium gilvum PYR-GCK chromosome, complete genomepolysaccharide biosynthesis protein1e-0861.6
NC_013522:1683326:1694950169495016964191470Thermanaerovibrio acidaminovorans DSM 6589, complete genomepolysaccharide biosynthesis protein1e-0861.2
NC_003910:2175305:2184201218420121854481248Colwellia psychrerythraea 34H, complete genomeputative polysaccharide biosynthesis protein2e-0860.8
NC_020063:1659795:1672045167204516732501206Enterobacteriaceae bacterium strain FGI 57, complete genomemembrane protein involved in the export of O-antigen and teichoic acid2e-0860.8
NC_010175:2062932:2076939207693920783781440Chloroflexus aurantiacus J-10-fl, complete genomepolysaccharide biosynthesis protein2e-0860.5
NC_012032:2059000:2072403207240320738421440Chloroflexus sp. Y-400-fl, complete genomepolysaccharide biosynthesis protein2e-0860.5
NC_013642:400651:4186864186864201251440Thermotoga naphthophila RKU-10, complete genomepolysaccharide biosynthesis protein7e-0858.9
NC_000853:648075:6533956533956548341440Thermotoga maritima MSB8, complete genomelipopolysaccharide biosynthesis protein7e-0858.9
NC_009718:643200:6455226455226469611440Fervidobacterium nodosum Rt17-B1, complete genomepolysaccharide biosynthesis protein2e-0757.4
NC_008322:1595500:1609908160990816111341227Shewanella sp. MR-7, complete genomepolysaccharide biosynthesis protein2e-0757
NC_013410:1152188:1192748119274811941721425Fibrobacter succinogenes subsp. succinogenes S85 chromosome,polysaccharide biosynthesis protein2e-0654.3
NC_006177:2883476:2897656289765628991401485Symbiobacterium thermophilum IAM 14863, complete genomepolysaccharide biosynthesis protein5e-0652.8
NC_007969:726086:7384067384067398331428Psychrobacter cryohalolentis K5, complete genomepolysaccharide biosynthesis protein5e-0652.8
NC_018645:2690325:2694413269441326958911479Desulfobacula toluolica Tol2, complete genomepolysaccharide biosynthesis protein5e-0652.8
NC_002939:2124642:2151750215175021533061557Geobacter sulfurreducens PCA, complete genomepolysaccharide biosynthesis domain protein7e-0652
NC_016026:997225:1017732101773210191711440Micavibrio aeruginosavorus ARL-13 chromosome, complete genomepolysaccharide biosynthesis family protein9e-0652