Pre_GI: BLASTP Hits

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Query: NC_005362:1651767:1680660 Lactobacillus johnsonii NCC 533, complete genome

Start: 1680660, End: 1680744, Length: 85

Host Lineage: Lactobacillus johnsonii; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: This strain is a human isolate from the Nestle strain collection that has been studied for immunomodulation as well as pathogen inhibition. Probiotic microorganism. They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, and other products such as fermented milks, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully cultivated, created, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses. Lactobacillus johnsonii is found in the human gut. It is a member of the acidophilus group of intestinal lactobacilli that has been extensively studied for their "probiotic" activities.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013504:1468227:14904971490497149058185Lactobacillus johnsonii FI9785 chromosome, complete genometRNA-Leu1e-0755.1
NC_005362:1651767:16662111666211166629585Lactobacillus johnsonii NCC 533, complete genometRNA-Leu1e-0755.1
NC_008530:1551356:15764391576439157652385Lactobacillus gasseri ATCC 33323, complete genometRNA-Leu1e-0755.1
NC_008530:1551356:15622651562265156234985Lactobacillus gasseri ATCC 33323, complete genometRNA-Leu1e-0755.1
NC_014724:439594:45540345540345548482Lactobacillus amylovorus GRL 1112 chromosome, complete genometRNA-Leu4e-0753.5
NC_006814:403723:41905041905041913182Lactobacillus acidophilus NCFM, complete genometRNA-Leu4e-0753.5
NC_014106:419511:43318343318343326482Lactobacillus crispatus ST1, complete genometRNA-Leu4e-0753.5
NC_018528:446610:46005446005446013582Lactobacillus helveticus R0052 chromosome, complete genometRNA-Leu4e-0753.5
NC_015214:437733:45267545267545275682Lactobacillus acidophilus 30SC chromosome, complete genometRNA-Leu4e-0753.5
NC_010080:445398:45596145596145604282Lactobacillus helveticus DPC 4571, complete genometRNA-Leu4e-0753.5
NC_004193:79588:10273010273010281485Oceanobacillus iheyensis HTE831, complete genometRNA-Leu6e-0649.7
NC_004193:79588:96749967499683385Oceanobacillus iheyensis HTE831, complete genometRNA-Leu6e-0649.7