Pre_GI: BLASTP Hits

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Query: NC_005362:1651767:1665073 Lactobacillus johnsonii NCC 533, complete genome

Start: 1665073, End: 1665162, Length: 90

Host Lineage: Lactobacillus johnsonii; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: This strain is a human isolate from the Nestle strain collection that has been studied for immunomodulation as well as pathogen inhibition. Probiotic microorganism. They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, and other products such as fermented milks, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully cultivated, created, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses. Lactobacillus johnsonii is found in the human gut. It is a member of the acidophilus group of intestinal lactobacilli that has been extensively studied for their "probiotic" activities.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_005362:1651767:16795221679522167961190Lactobacillus johnsonii NCC 533, complete genometRNA-Ser6e-0959.7
NC_008530:1551356:15611271561127156121690Lactobacillus gasseri ATCC 33323, complete genometRNA-Ser6e-0959.7
NC_008530:1551356:15753011575301157539090Lactobacillus gasseri ATCC 33323, complete genometRNA-Ser6e-0959.7
NC_014724:439594:45654145654145663090Lactobacillus amylovorus GRL 1112 chromosome, complete genometRNA-Ser9e-0855.5
NC_006814:403723:42017842017842026790Lactobacillus acidophilus NCFM, complete genometRNA-Ser9e-0855.5
NC_015214:437733:45381145381145390090Lactobacillus acidophilus 30SC chromosome, complete genometRNA-Ser9e-0855.5
NC_010080:445398:45709045709045717990Lactobacillus helveticus DPC 4571, complete genometRNA-Ser2e-0754.3
NC_014106:419511:43431843431843441093Lactobacillus crispatus ST1, complete genometRNA-Ser1e-0651.6