Pre_GI: BLASTP Hits

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Query: NC_005140:960261:975678 Vibrio vulnificus YJ016 chromosome II, complete sequence

Start: 975678, End: 975839, Length: 162

Host Lineage: Vibrio vulnificus; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This is a Biotype 1 hospital isolate from Taiwan. It contains larger chromosomes and >1000 genes as compared to Vibrio cholerae and contains a conjugative plasmid, pYJ016. There are numerous virulence factors including a cytolysin, protease, capsular polysaccharide as well as iron-uptake systems encoded in the genome. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Organisms of this species are opportunistic pathogens that can attack immunocompromised patients and causes gastroenteritis (inflammation of mucous membranes of stomach and intestine), wound infections, and primary septicemia (spread of the organism through the blood). This organism is the major cause of death from eating raw oysters, especially in people with liver damage. It only affects humans and other primates.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016945:666000:6703426703426717961455Vibrio cholerae IEC224 chromosome II, complete sequencecobyric acid synthase6e-1476.3
NC_010506:4951500:4952392495239249539751584Shewanella woodyi ATCC 51908, complete genomecobyric acid synthase CobQ1e-1375.1
NC_015497:3794000:3816695381669538182361542Glaciecola agarilytica 4H-3-7+YE-5 chromosome, complete genomecobyric acid synthase CobQ7e-1269.3
NC_016027:1357659:1388457138845713899111455Gluconacetobacter xylinus NBRC 3288, complete genomecobyric acid synthase2e-0961.2
NC_014329:1407880:1418431141843114198761446Corynebacterium pseudotuberculosis FRC41 chromosome, completecobyric acid synthase3e-0960.8
NC_016781:1408235:1418369141836914198141446Corynebacterium pseudotuberculosis 3/99-5 chromosome, completecobyric acid synthase3e-0960.8
NC_013595:8162181:8165901816590181674301530Streptosporangium roseum DSM 43021, complete genomeadenosylcobyric acid synthase (glutamine- hydrolyzing)3e-0960.8
NC_019673:7797666:7815737781573778173021566Saccharothrix espanaensis DSM 44229 complete genomeCobyric acid synthase2e-0960.8
NC_003911:1265972:1310964131096413124211458Silicibacter pomeroyi DSS-3, complete genomecobyric acid synthase7e-0959.3
NC_012962:1827000:1840784184078418423221539Photorhabdus asymbiotica, complete genomecobyric acid synthase8e-0958.9
NC_016627:4203775:4207249420724942087511503Clostridium clariflavum DSM 19732 chromosome, complete genomeadenosylcobyric acid synthase8e-0958.9
NC_011898:1558208:1588518158851815900621545Clostridium cellulolyticum H10, complete genomecobyric acid synthase CobQ2e-0857.8
NC_020911:3410857:3411201341120134126551455Octadecabacter antarcticus 307, complete genomecobyric acid synthase3e-0857
NC_019903:1058657:1070369107036910719401572Desulfitobacterium dichloroeliminans LMG P-21439 chromosome,adenosylcobyric acid synthase3e-0857
NC_013892:853366:8547268547268562671542Xenorhabdus bovienii SS-2004 chromosome, complete genomecobyric acid synthase4e-0856.6
NC_013887:1668913:1690273169027316917511479Methanocaldococcus sp. FS406-22 chromosome, complete genomecobyric acid synthase CobQ6e-0856.2
NC_000909:404961:4255524255524270391488Methanocaldococcus jannaschii DSM 2661, complete genomecobyric acid synthase6e-0856.2
NC_011296:1151346:1151346115134611528271482Thermodesulfovibrio yellowstonii DSM 11347, complete genomecobyric acid synthase CobQ6e-0856.2
NC_015847:1261276:1288926128892612904041479Methanococcus maripaludis XI chromosome, complete genomecobyric acid synthase6e-0856.2
NC_009135:330628:3359353359353374131479Methanococcus maripaludis C5, complete genomecobyric acid synthase CobQ6e-0856.2
NC_009637:438037:4707534707534722311479Methanococcus maripaludis C7 chromosome, complete genomecobyric acid synthase6e-0856.2
NC_014844:903877:9185789185789213102733Desulfovibrio aespoeensis Aspo-2 chromosome, complete genomecobyric acid synthase CobQ5e-0856.2
NC_011094:2061000:2079211207921120807311521Salmonella enterica subsp. enterica serovar Schwarzengrund strcobyric acid synthase1e-0755.5
NC_011149:2040396:2057523205752320590431521Salmonella enterica subsp. enterica serovar Agona str. SL483,cobyric acid synthase CobQ1e-0755.5
NC_014221:398636:4219054219054239532049Truepera radiovictrix DSM 17093 chromosome, complete genomecobyric acid synthase CobQ1e-0755.1
NC_012491:1263469:1281378128137812828741497Brevibacillus brevis NBRC 100599, complete genomecobyric acid synthase1e-0755.1
NC_021171:415771:4296894296894312241536Bacillus sp. 1NLA3E, complete genomecobyric acid synthase2e-0754.7
NC_015562:1460124:1473956147395614754341479Methanotorris igneus Kol 5 chromosome, complete genomeCobyric acid synthase2e-0754.3
NC_009253:2927802:2932995293299529345331539Desulfotomaculum reducens MI-1 chromosome, complete genomecobyric acid synthase CobQ5e-0753.1
NC_013173:3890370:3890370389037038929282559Desulfomicrobium baculatum DSM 4028, complete genomecobyric acid synthase CobQ6e-0752.8
NC_013517:1055854:1101894110189411033781485Sebaldella termitidis ATCC 33386, complete genomecobyric acid synthase CobQ9e-0752.4
NC_014633:442755:4744064744064759141509Ilyobacter polytropus DSM 2926 plasmid pILYOP01, complete sequenceadenosylcobyric acid synthase9e-0752.4
NC_013747:97500:1053911053911070071617Haloterrigena turkmenica DSM 5511 plasmid pHTUR04, completecobyric acid synthase CobQ1e-0651.6
NC_007516:731193:7311937311937326891497Synechococcus sp. CC9605, complete genomecobyric acid synthase1e-0651.6
NC_009718:1470972:147883314788331479660828Fervidobacterium nodosum Rt17-B1, complete genomecobyrinic acid ac-diamide synthase1e-0651.6
NC_003030:1510000:1517707151770715191821476Clostridium acetobutylicum ATCC 824, complete genomeadenosyl-cobyric acid synthase1e-0651.6
NC_015687:1508664:1519308151930815207831476Clostridium acetobutylicum DSM 1731 chromosome, complete genomecobyric acid synthase1e-0651.6
NC_017295:1507956:1517121151712115185961476Clostridium acetobutylicum EA 2018 chromosome, complete genomecobyric acid synthase1e-0651.6
NC_014483:1376500:1388615138861513902611647Paenibacillus polymyxa E681 chromosome, complete genomeCobyric acid synthase2e-0651.2
NC_016641:3173250:3185956318595631875721617Paenibacillus terrae HPL-003 chromosome, complete genomecobyric acid synthase2e-0651.2
NC_010382:3350816:3354450335445033559491500Lysinibacillus sphaericus C3-41, complete genomecobyric acid synthase3e-0650.8
NC_009952:2217877:2219140221914022206001461Dinoroseobacter shibae DFL 12, complete genomecobyric acid synthase3e-0650.4