Pre_GI: BLASTP Hits

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Query: NC_005140:883857:894533 Vibrio vulnificus YJ016 chromosome II, complete sequence

Start: 894533, End: 895045, Length: 513

Host Lineage: Vibrio vulnificus; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This is a Biotype 1 hospital isolate from Taiwan. It contains larger chromosomes and >1000 genes as compared to Vibrio cholerae and contains a conjugative plasmid, pYJ016. There are numerous virulence factors including a cytolysin, protease, capsular polysaccharide as well as iron-uptake systems encoded in the genome. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Organisms of this species are opportunistic pathogens that can attack immunocompromised patients and causes gastroenteritis (inflammation of mucous membranes of stomach and intestine), wound infections, and primary septicemia (spread of the organism through the blood). This organism is the major cause of death from eating raw oysters, especially in people with liver damage. It only affects humans and other primates.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_005140:883857:890172890172890684513Vibrio vulnificus YJ016 chromosome II, complete sequencehypothetical protein1e-73275
NC_016628:193000:211408211408211929522Vibrio furnissii NCTC 11218 chromosome 2, complete sequencehypothetical protein7e-44176
NC_016628:193000:206717206717207238522Vibrio furnissii NCTC 11218 chromosome 2, complete sequencehypothetical protein7e-44176
NC_016602:1994110:200348320034832004004522Vibrio furnissii NCTC 11218 chromosome 1, complete sequencehypothetical protein7e-44176
NC_016901:2661971:267351826735182673901384Shewanella baltica OS678 chromosome, complete genomehelix-turn-helix domain-containing protein6e-1890.1
NC_009997:2699644:271705627170562717439384Shewanella baltica OS195, complete genometranscriptional regulator, XRE family6e-1890.1
NC_009997:2699644:271360127136012713984384Shewanella baltica OS195, complete genometranscriptional regulator, XRE family6e-1890.1
NC_009997:2699644:272051127205112720894384Shewanella baltica OS195, complete genometranscriptional regulator, XRE family6e-1890.1
NC_009012:2927793:293408629340862934514429Clostridium thermocellum ATCC 27405, complete genometranscriptional regulator, XRE family2e-0754.7
NC_000964:2146000:222025722202572220583327Bacillus subtilis subsp. subtilis str. 168, complete genomehypothetical protein2e-0754.7
NC_009801:2193000:221593622159362216331396Escherichia coli E24377A, complete genomeputative transcriptional regulator DicA6e-0753.5
NC_009617:1897887:190150219015021901873372Clostridium beijerinckii NCIMB 8052 chromosome, complete genomehelix-turn-helix domain-containing protein1e-0652.8
NC_014727:1832144:185419718541971854565369Lactobacillus delbrueckii subsp. bulgaricus ND02 chromosome,transcriptional regulator (xre family)1e-0652.8
NC_018866:27878:3206232062331081047Dehalobacter sp. DCA chromosome, complete genomehypothetical protein1e-0652.4
NC_008054:1617544:164130916413091641668360Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, completePutative transcriptional regulator (Xre family)1e-0652.4
NC_008529:1634403:165655516565551656914360Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365, completeTranscriptional regulator, xre family1e-0652.4
NC_017294:115500:118873118873119088216Candidatus Arthromitus sp. SFB-mouse-Yit, complete genometranscriptional regulator2e-0652
NC_013385:90331:106210106210106566357Ammonifex degensii KC4, complete genometranscriptional regulator, XRE family4e-0650.8
NC_007794:3218729:322968332296833230366684Novosphingobium aromaticivorans DSM 12444, complete genomeputative prophage repressor6e-0650.1