Pre_GI: BLASTP Hits

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Query: NC_005139:343500:362904 Vibrio vulnificus YJ016 chromosome I, complete sequence

Start: 362904, End: 364055, Length: 1152

Host Lineage: Vibrio vulnificus; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This is a Biotype 1 hospital isolate from Taiwan. It contains larger chromosomes and >1000 genes as compared to Vibrio cholerae and contains a conjugative plasmid, pYJ016. There are numerous virulence factors including a cytolysin, protease, capsular polysaccharide as well as iron-uptake systems encoded in the genome. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Organisms of this species are opportunistic pathogens that can attack immunocompromised patients and causes gastroenteritis (inflammation of mucous membranes of stomach and intestine), wound infections, and primary septicemia (spread of the organism through the blood). This organism is the major cause of death from eating raw oysters, especially in people with liver damage. It only affects humans and other primates.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011768:1718869:1737871173787117390101140Desulfatibacillum alkenivorans AK-01, complete genomePP-loop domain protein1e-151536
NC_015732:529201:5657535657535668921140Spirochaeta caldaria DSM 7334 chromosome, complete genomeN-acetyl sugar amidotransferase3e-133474
NC_009656:1994392:2017487201748720186291143Pseudomonas aeruginosa PA7 chromosome, complete genomeLPS biosynthesis protein WbpG2e-125449
NC_005363:1604337:1626805162680516279891185Bdellovibrio bacteriovorus HD100, complete genomeLPS biosynthesis protein WbpG4e-122437
NC_009483:1936486:1961615196161519627571143Geobacter uraniireducens Rf4 chromosome, complete genomehypothetical protein1e-120433
NC_015379:1887275:1905250190525019063981149Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,Putative LPS biosynthesis protein WbpG1e-119430
NC_014640:6745873:6760689676068967618341146Achromobacter xylosoxidans A8 chromosome, complete genomeLPS biosynthesis protein WbpG2e-118426
NC_015424:3112637:3133519313351931346641146Aeromonas veronii B565 chromosome, complete genomeamidotransferase2e-117422
NC_002516:3519000:3533948353394835350811134Pseudomonas aeruginosa PAO1, complete genomeLPS biosynthesis protein WbpG2e-91336
NC_008781:3302934:3313711331371133148531143Polaromonas naphthalenivorans CJ2, complete genomeLPS biosynthesis protein WbpG4e-90331
NC_008380:855246:8889228889228900821161Rhizobium leguminosarum bv. viciae 3841, complete genomeputative lipopolysaccharide synthesis protein7e-89327
NC_015703:4531578:4556271455627145573981128Runella slithyformis DSM 19594 chromosome, complete genomeN-acetyl sugar amidotransferase3e-75282
NC_009659:2523874:2542093254209325432411149Janthinobacterium sp. Marseille chromosome, complete genomeLPS biosynthesis protein WbpG2e-62239
NC_014323:4792048:4807883480788348091151233Herbaspirillum seropedicae SmR1 chromosome, complete genomecell cycle control ATPase7e-58224
NC_009850:661802:6800756800756812471173Arcobacter butzleri RM4018, complete genomeputative LPS biosynthesis protein WbpG8e-57221
NC_018645:4277393:4296258429625842973581101Desulfobacula toluolica Tol2, complete genomehypothetical protein6e-23108
NC_019977:1456366:1472871147287114739471077Methanomethylovorans hollandica DSM 15978, complete genomeputative ATPase of the PP-loop superfamily implicated in cell cycle control1e-1584.3
NC_013522:698114:7114587114587126301173Thermanaerovibrio acidaminovorans DSM 6589, complete genomeLPS biosynthesis protein2e-1480.5
NC_010645:73573:8591385913878561944Bordetella avium 197N, complete genomelipopolysaccharide biosynthesis protein3e-1272.8
NC_013194:69634:8482584825868792055Candidatus Accumulibacter phosphatis clade IIA str. UW-1, completeglutamine amidotransferase class-II1e-1171.2
NC_013722:1785692:1785692178569217885172826Xanthomonas albilineans, complete genomeamino acid adenylation;albicidin synthetase protein4e-1169.3
NC_013061:4712051:4734063473406347353161254Pedobacter heparinus DSM 2366, complete genomeputative LPS biosynthesis protein9e-1168.2
NC_017187:641822:6532026532026543621161Arcobacter butzleri ED-1, complete genomeLPS biosynthesis protein3e-1066.6
NC_012108:4118888:4130348413034841313581011Desulfobacterium autotrophicum HRM2, complete genomeputative ATPAse of LPS biosynthesis4e-1065.9
NC_016620:341699:3770423770423782141173Bacteriovorax marinus SJ, complete genomeputative LPS biosynthesis glycosyl transferase protein9e-1065.1
NC_005071:87907:1123301123301135771248Prochlorococcus marinus str. MIT 9313, complete genomeLPS biosynthesis protein2e-0963.9
NC_005139:305420:3295243295243306601137Vibrio vulnificus YJ016 chromosome I, complete sequenceputitive LPS biosynthesis protein2e-0963.5
NC_008820:1766973:1773623177362317747531131Prochlorococcus marinus str. MIT 9303, complete genomehypothetical protein7e-0962
NC_012997:1335902:1357080135708013583721293Teredinibacter turnerae T7901, complete genomehypothetical protein3e-0859.7
NC_000868:1730820:173368317336831734507825Pyrococcus abyssi GE5, complete genomehypothetical protein3e-0859.7
NC_004757:2412161:2424692242469224257621071Nitrosomonas europaea ATCC 19718, complete genomehypothetical protein3e-0756.6
NC_005070:419261:4383264383264394291104Synechococcus sp. WH 8102, complete genomehypothetical protein6e-0755.5
NC_005139:305420:3282523282523295201269Vibrio vulnificus YJ016 chromosome I, complete sequenceputitive LPS biosynthesis protein7e-0755.5
NC_011060:514874:5199355199355212571323Pelodictyon phaeoclathratiforme BU-1, complete genomeLPS biosynthesis protein, PseA-like protein5e-0652.8