Pre_GI: BLASTP Hits

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Query: NC_005139:343500:351200 Vibrio vulnificus YJ016 chromosome I, complete sequence

Start: 351200, End: 352519, Length: 1320

Host Lineage: Vibrio vulnificus; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This is a Biotype 1 hospital isolate from Taiwan. It contains larger chromosomes and >1000 genes as compared to Vibrio cholerae and contains a conjugative plasmid, pYJ016. There are numerous virulence factors including a cytolysin, protease, capsular polysaccharide as well as iron-uptake systems encoded in the genome. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Organisms of this species are opportunistic pathogens that can attack immunocompromised patients and causes gastroenteritis (inflammation of mucous membranes of stomach and intestine), wound infections, and primary septicemia (spread of the organism through the blood). This organism is the major cause of death from eating raw oysters, especially in people with liver damage. It only affects humans and other primates.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013037:5536433:5553725555372555550711347Dyadobacter fermentans DSM 18053, complete genomepolysaccharide biosynthesis protein5e-28125
NC_016776:4115889:4117620411762041189601341Bacteroides fragilis 638R, complete genomeputative LPS biosynthesis polysaccharide transporter/flippase3e-23110
NC_014828:2497462:2519147251914725205051359Ethanoligenens harbinense YUAN-3 chromosome, complete genomepolysaccharide biosynthesis protein6e-22105
NC_015914:917124:9171249171249185001377Cyclobacterium marinum DSM 745 chromosome, complete genomepolysaccharide biosynthesis protein1e-21105
NC_009614:1999130:2023957202395720253001344Bacteroides vulgatus ATCC 8482 chromosome, complete genomeLPS biosynthesis related polysaccharide transporter/flippase3e-1996.7
NC_014394:1373602:1381015138101513823251311Gallionella capsiferriformans ES-2 chromosome, complete genomepolysaccharide biosynthesis protein2e-1480.9
NC_017075:4421486:4430525443052544318381314Rubrivivax gelatinosus IL144, complete genomepolysaccharide biosynthesis family protein1e-1171.2
NC_006513:3486558:3495076349507634964011326Azoarcus sp. EbN1, complete genomeprobably involved in the export of O-antigen (flippase Wzx)1e-0965.1