Pre_GI: BLASTP Hits

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Query: NC_005139:2201820:2260199 Vibrio vulnificus YJ016 chromosome I, complete sequence

Start: 2260199, End: 2261113, Length: 915

Host Lineage: Vibrio vulnificus; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This is a Biotype 1 hospital isolate from Taiwan. It contains larger chromosomes and >1000 genes as compared to Vibrio cholerae and contains a conjugative plasmid, pYJ016. There are numerous virulence factors including a cytolysin, protease, capsular polysaccharide as well as iron-uptake systems encoded in the genome. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Organisms of this species are opportunistic pathogens that can attack immunocompromised patients and causes gastroenteritis (inflammation of mucous membranes of stomach and intestine), wound infections, and primary septicemia (spread of the organism through the blood). This organism is the major cause of death from eating raw oysters, especially in people with liver damage. It only affects humans and other primates.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011420:1178762:118864111886411189555915Rhodospirillum centenum SW, complete genomehypothetical protein4e-42171
NC_008782:2326439:234835423483542349265912Acidovorax sp. JS42, complete genomehypothetical protein2e-40166
NC_008758:12000:130061300613941936Polaromonas naphthalenivorans CJ2 plasmid pPNAP02, completehypothetical protein2e-39163
NC_007333:810381:836040836040836951912Thermobifida fusca YX, complete genomehypothetical protein8e-32137
NC_014307:233045:239823239823240770948Ralstonia solanacearum CFBP2957 chromosome, complete genomehypothetical protein1e-28127
NC_015312:1265797:1295035129503512961471113Pseudonocardia dioxanivorans CB1190 chromosome, complete genomehypothetical protein1e-1274.3
NC_015320:743983:754481754481755221741Archaeoglobus veneficus SNP6 chromosome, complete genomehypothetical protein2e-1273.2
NC_009921:8549757:861748886174888617976489Frankia sp. EAN1pec, complete genomeconserved hypothetical protein7e-0755.1
NC_011083:2847318:285647928564792857291813Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,putative cytoplasmic protein3e-0653.1
NC_016860:2896254:290553829055382906350813Salmonella enterica subsp. enterica serovar Typhimurium strputative cytoplasmic protein3e-0653.1
NC_017046:2896651:290327929032792904106828Salmonella enterica subsp. enterica serovar Typhimurium str. 798hypothetical protein3e-0652.8
NC_016863:2844883:285045028504502851277828Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative cytoplasmic protein3e-0652.8
NC_016857:2871689:290453729045372905364828Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative cytoplasmic protein3e-0652.8
NC_016856:2896630:290219729021972903024828Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative cytoplasmic protein3e-0652.8
NC_016810:2871689:290453729045372905364828Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein3e-0652.8
NC_003197:2870268:288197228819722882799828Salmonella typhimurium LT2, complete genomeputative cytoplasmic protein3e-0652.8