Pre_GI: BLASTP Hits

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Query: NC_005139:2201820:2250414 Vibrio vulnificus YJ016 chromosome I, complete sequence

Start: 2250414, End: 2250695, Length: 282

Host Lineage: Vibrio vulnificus; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This is a Biotype 1 hospital isolate from Taiwan. It contains larger chromosomes and >1000 genes as compared to Vibrio cholerae and contains a conjugative plasmid, pYJ016. There are numerous virulence factors including a cytolysin, protease, capsular polysaccharide as well as iron-uptake systems encoded in the genome. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Organisms of this species are opportunistic pathogens that can attack immunocompromised patients and causes gastroenteritis (inflammation of mucous membranes of stomach and intestine), wound infections, and primary septicemia (spread of the organism through the blood). This organism is the major cause of death from eating raw oysters, especially in people with liver damage. It only affects humans and other primates.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011138:3881446:3886291388629138877001410Alteromonas macleodii 'Deep ecotype', complete genometransposase and inactivated derivative7e-2095.9
NC_011138:1374520:1378476137847613798851410Alteromonas macleodii 'Deep ecotype', complete genomehypothetical transposase7e-2095.9
NC_011138:397329:398718398718399335618Alteromonas macleodii 'Deep ecotype', complete genometransposase2e-1994
NC_010981:242500:2673012673012686921392Wolbachia pipientis, complete genomePutative transposase2e-0754.3
NC_014623:5181000:5185499518549951866831185Stigmatella aurantiaca DW4/3-1 chromosome, complete genometransposase, is66 family2e-0754.3
NC_015711:4067905:4085691408569140876041914Myxococcus fulvus HW-1 chromosome, complete genometransposase, is66 family protein4e-0753.5
NC_008095:5062491:5069387506938750707931407Myxococcus xanthus DK 1622, complete genometransposase, unclassified family2e-0650.8
NC_017059:3404000:3409893340989334111851293Rhodospirillum photometricum DSM 122, complete genomeTransposase IS664e-0650.1