Pre_GI: BLASTP Hits

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Query: NC_005139:2201820:2225977 Vibrio vulnificus YJ016 chromosome I, complete sequence

Start: 2225977, End: 2227230, Length: 1254

Host Lineage: Vibrio vulnificus; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This is a Biotype 1 hospital isolate from Taiwan. It contains larger chromosomes and >1000 genes as compared to Vibrio cholerae and contains a conjugative plasmid, pYJ016. There are numerous virulence factors including a cytolysin, protease, capsular polysaccharide as well as iron-uptake systems encoded in the genome. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Organisms of this species are opportunistic pathogens that can attack immunocompromised patients and causes gastroenteritis (inflammation of mucous membranes of stomach and intestine), wound infections, and primary septicemia (spread of the organism through the blood). This organism is the major cause of death from eating raw oysters, especially in people with liver damage. It only affects humans and other primates.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007651:72952:1122091122091134891281Burkholderia thailandensis E264 chromosome I, complete sequencehypothetical protein3e-82305
NC_014973:3452100:3479874347987434811031230Geobacter sp. M18 chromosome, complete genomehypothetical protein4e-41169
NC_012108:4971086:5007084500708450083161233Desulfobacterium autotrophicum HRM2, complete genomehypothetical protein1e-34147
NC_015152:2549756:2586593258659325878191227Spirochaeta sp. Buddy chromosome, complete genomehypothetical protein5e-34145
NC_007925:4355413:4373350437335043745731224Rhodopseudomonas palustris BisB18, complete genomehypothetical protein2e-32140
NC_017955:4075804:4094542409454240957201179Modestobacter marinus, complete genomehypothetical protein4e-32139
NC_015416:161289:1600571600571612951239Methanosaeta concilii GP-6 chromosome, complete genomehypothetical protein5e-31135
NC_013173:1437464:1448055144805514492931239Desulfomicrobium baculatum DSM 4028, complete genomehypothetical protein1e-30134
NC_018581:2768743:2801418280141828025661149Gordonia sp. KTR9 chromosome, complete genomehypothetical protein2e-30133
NC_011071:429204:4501694501694513591191Stenotrophomonas maltophilia R551-3, complete genomehypothetical protein6e-30132
NC_014151:3611956:3634528363452836357211194Cellulomonas flavigena DSM 20109 chromosome, complete genomehypothetical protein2e-28127
NC_013223:1763631:1783262178326217844881227Desulfohalobium retbaense DSM 5692, complete genomehypothetical protein4e-27122
NC_014830:3387479:3414564341456434157301167Intrasporangium calvum DSM 43043 chromosome, complete genomehypothetical protein6e-25115
NC_016604:917972:9197619197619209961236Mycobacterium rhodesiae NBB3 chromosome, complete genomehypothetical protein1e-23111
NC_010725:3315007:333928833392883339866579Methylobacterium populi BJ001, complete genome4e-21102
NC_009675:4644173:4661607466160746628361230Anaeromyxobacter sp. Fw109-5 chromosome, complete genomehypothetical protein9e-1478.6
NC_009720:3281000:3305832330583233070491218Xanthobacter autotrophicus Py2, complete genomehypothetical protein1e-1274.3
NC_015576:612164:638142638142638414273Mycobacterium sp. JDM601 chromosome, complete genomehypothetical protein1e-1068.2
NC_007517:3430237:3456479345647934576961218Geobacter metallireducens GS-15, complete genomehypothetical protein1e-1067.8
NC_010676:2720068:2746173274617327473691197Burkholderia phytofirmans PsJN chromosome 2, complete sequencehypothetical protein1e-0861.2