Pre_GI: BLASTP Hits

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Query: NC_005139:1784000:1912426 Vibrio vulnificus YJ016 chromosome I, complete sequence

Start: 1912426, End: 1912857, Length: 432

Host Lineage: Vibrio vulnificus; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This is a Biotype 1 hospital isolate from Taiwan. It contains larger chromosomes and >1000 genes as compared to Vibrio cholerae and contains a conjugative plasmid, pYJ016. There are numerous virulence factors including a cytolysin, protease, capsular polysaccharide as well as iron-uptake systems encoded in the genome. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Organisms of this species are opportunistic pathogens that can attack immunocompromised patients and causes gastroenteritis (inflammation of mucous membranes of stomach and intestine), wound infections, and primary septicemia (spread of the organism through the blood). This organism is the major cause of death from eating raw oysters, especially in people with liver damage. It only affects humans and other primates.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012580:301500:312669312669313064396Vibrio cholerae M66-2 chromosome II, complete sequencehypothetical protein2e-55213
NC_016446:49618:867048670487060357Vibrio cholerae O1 str. 2010EL-1786 chromosome 2, completehypothetical protein3e-51199
NC_016446:49618:856488564886004357Vibrio cholerae O1 str. 2010EL-1786 chromosome 2, completehypothetical protein3e-51199