Pre_GI: BLASTP Hits

Some Help

Query: NC_005139:1784000:1902178 Vibrio vulnificus YJ016 chromosome I, complete sequence

Start: 1902178, End: 1902414, Length: 237

Host Lineage: Vibrio vulnificus; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This is a Biotype 1 hospital isolate from Taiwan. It contains larger chromosomes and >1000 genes as compared to Vibrio cholerae and contains a conjugative plasmid, pYJ016. There are numerous virulence factors including a cytolysin, protease, capsular polysaccharide as well as iron-uptake systems encoded in the genome. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Organisms of this species are opportunistic pathogens that can attack immunocompromised patients and causes gastroenteritis (inflammation of mucous membranes of stomach and intestine), wound infections, and primary septicemia (spread of the organism through the blood). This organism is the major cause of death from eating raw oysters, especially in people with liver damage. It only affects humans and other primates.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_005139:1784000:189086018908601891657798Vibrio vulnificus YJ016 chromosome I, complete sequencehypothetical protein1e-2098.2
NC_005139:1784000:186282718628271862991165Vibrio vulnificus YJ016 chromosome I, complete sequencehypothetical protein2e-2097.8
NC_005139:1784000:184452418445241844697174Vibrio vulnificus YJ016 chromosome I, complete sequencehypothetical protein2e-1891.3
NC_005139:1784000:182464218246421824806165Vibrio vulnificus YJ016 chromosome I, complete sequencehypothetical protein2e-1890.9
NC_005139:1784000:190084519008451900985141Vibrio vulnificus YJ016 chromosome I, complete sequencehypothetical protein4e-1890.1
NC_016628:1:347434743617144Vibrio furnissii NCTC 11218 chromosome 2, complete sequencehypothetical protein2e-1271.2
NC_005139:1784000:183984918398491840364516Vibrio vulnificus YJ016 chromosome I, complete sequencehypothetical protein5e-0959.7
NC_005139:1784000:183652918365291836720192Vibrio vulnificus YJ016 chromosome I, complete sequencehypothetical protein1e-0858.5
NC_005139:1784000:191715619171561917320165Vibrio vulnificus YJ016 chromosome I, complete sequencehypothetical protein4e-0856.6
NC_005139:1784000:181262118126211812785165Vibrio vulnificus YJ016 chromosome I, complete sequencehypothetical protein4e-0856.6
NC_016628:1:1405140526401236Vibrio furnissii NCTC 11218 chromosome 2, complete sequencephospholipase D/Transphosphatidylase6e-0752.8
NC_005139:1784000:192365819236581923837180Vibrio vulnificus YJ016 chromosome I, complete sequencehypothetical protein5e-0649.7