Pre_GI: BLASTP Hits

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Query: NC_005139:1784000:1884276 Vibrio vulnificus YJ016 chromosome I, complete sequence

Start: 1884276, End: 1884773, Length: 498

Host Lineage: Vibrio vulnificus; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This is a Biotype 1 hospital isolate from Taiwan. It contains larger chromosomes and >1000 genes as compared to Vibrio cholerae and contains a conjugative plasmid, pYJ016. There are numerous virulence factors including a cytolysin, protease, capsular polysaccharide as well as iron-uptake systems encoded in the genome. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Organisms of this species are opportunistic pathogens that can attack immunocompromised patients and causes gastroenteritis (inflammation of mucous membranes of stomach and intestine), wound infections, and primary septicemia (spread of the organism through the blood). This organism is the major cause of death from eating raw oysters, especially in people with liver damage. It only affects humans and other primates.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_004459:2443000:253098425309842531466483Vibrio vulnificus CMCP6 chromosome I, complete sequenceCell wall-associated hydrolase8e-80295
NC_004459:2443000:253560625356062536148543Vibrio vulnificus CMCP6 chromosome I, complete sequenceCation transport ATPase5e-0753.9
NC_005139:1784000:189010518901051890299195Vibrio vulnificus YJ016 chromosome I, complete sequencehypothetical protein8e-0649.7
NC_005139:1784000:190883019088301908952123Vibrio vulnificus YJ016 chromosome I, complete sequencehypothetical protein9e-0649.7