Pre_GI: BLASTP Hits

Some Help

Query: NC_005139:1784000:1874063 Vibrio vulnificus YJ016 chromosome I, complete sequence

Start: 1874063, End: 1874569, Length: 507

Host Lineage: Vibrio vulnificus; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This is a Biotype 1 hospital isolate from Taiwan. It contains larger chromosomes and >1000 genes as compared to Vibrio cholerae and contains a conjugative plasmid, pYJ016. There are numerous virulence factors including a cytolysin, protease, capsular polysaccharide as well as iron-uptake systems encoded in the genome. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Organisms of this species are opportunistic pathogens that can attack immunocompromised patients and causes gastroenteritis (inflammation of mucous membranes of stomach and intestine), wound infections, and primary septicemia (spread of the organism through the blood). This organism is the major cause of death from eating raw oysters, especially in people with liver damage. It only affects humans and other primates.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014965:1428902:151078215107821511063282Vibrio vulnificus MO6-24/O chromosome I, complete sequencehypothetical protein9e-51199
NC_013947:373862:379111379111379647537Stackebrandtia nassauensis DSM 44728 chromosome, complete genomehypothetical protein3e-21101
NC_015638:3202491:321212332121233212659537Lacinutrix sp. 5H-3-7-4 chromosome, complete genomehypothetical protein1e-2099
NC_011894:983572:100191810019181002421504Methylobacterium nodulans ORS 2060, complete genomehypothetical protein5e-1890.5
NC_004369:1051013:105300110530011053522522Corynebacterium efficiens YS-314, complete genomehypothetical protein2e-1272