Pre_GI: BLASTP Hits

Some Help

Query: NC_005139:1784000:1858598 Vibrio vulnificus YJ016 chromosome I, complete sequence

Start: 1858598, End: 1858723, Length: 126

Host Lineage: Vibrio vulnificus; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This is a Biotype 1 hospital isolate from Taiwan. It contains larger chromosomes and >1000 genes as compared to Vibrio cholerae and contains a conjugative plasmid, pYJ016. There are numerous virulence factors including a cytolysin, protease, capsular polysaccharide as well as iron-uptake systems encoded in the genome. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Organisms of this species are opportunistic pathogens that can attack immunocompromised patients and causes gastroenteritis (inflammation of mucous membranes of stomach and intestine), wound infections, and primary septicemia (spread of the organism through the blood). This organism is the major cause of death from eating raw oysters, especially in people with liver damage. It only affects humans and other primates.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_005139:1784000:187714518771451877279135Vibrio vulnificus YJ016 chromosome I, complete sequencehypothetical protein2e-1374.7
NC_014965:1428902:144069014406901440851162Vibrio vulnificus MO6-24/O chromosome I, complete sequencehypothetical protein3e-1270.5
NC_005139:1784000:189184518918451891970126Vibrio vulnificus YJ016 chromosome I, complete sequencehypothetical protein3e-1270.5
NC_014965:1428902:145350414535041453677174Vibrio vulnificus MO6-24/O chromosome I, complete sequencehypothetical protein1e-1065.5
NC_014965:1428902:153831415383141538439126Vibrio vulnificus MO6-24/O chromosome I, complete sequencehypothetical protein1e-0961.6
NC_005139:1784000:186940718694071869580174Vibrio vulnificus YJ016 chromosome I, complete sequencehypothetical protein5e-0959.7
NC_005139:1784000:185186218518621851987126Vibrio vulnificus YJ016 chromosome I, complete sequencehypothetical protein1e-0858.9
NC_005139:1784000:186633818663381866463126Vibrio vulnificus YJ016 chromosome I, complete sequencehypothetical protein1e-0858.9
NC_012580:301500:314828314828314989162Vibrio cholerae M66-2 chromosome II, complete sequencehypothetical protein1e-0858.9
NC_012580:301500:320220320220320381162Vibrio cholerae M66-2 chromosome II, complete sequencehypothetical protein1e-0858.9
NC_005139:1784000:180740318074031807537135Vibrio vulnificus YJ016 chromosome I, complete sequencehypothetical protein3e-0857.4
NC_005139:1784000:185342118534211853546126Vibrio vulnificus YJ016 chromosome I, complete sequencehypothetical protein3e-0857.4
NC_005139:1784000:188938018893801889541162Vibrio vulnificus YJ016 chromosome I, complete sequencehypothetical protein3e-0857
NC_005139:1784000:188079818807981880932135Vibrio vulnificus YJ016 chromosome I, complete sequencehypothetical protein2e-0754.7
NC_014965:1428902:145254514525451452718174Vibrio vulnificus MO6-24/O chromosome I, complete sequencehypothetical protein7e-0649.3