Pre_GI: BLASTP Hits

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Query: NC_005139:1784000:1814576 Vibrio vulnificus YJ016 chromosome I, complete sequence

Start: 1814576, End: 1814701, Length: 126

Host Lineage: Vibrio vulnificus; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This is a Biotype 1 hospital isolate from Taiwan. It contains larger chromosomes and >1000 genes as compared to Vibrio cholerae and contains a conjugative plasmid, pYJ016. There are numerous virulence factors including a cytolysin, protease, capsular polysaccharide as well as iron-uptake systems encoded in the genome. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Organisms of this species are opportunistic pathogens that can attack immunocompromised patients and causes gastroenteritis (inflammation of mucous membranes of stomach and intestine), wound infections, and primary septicemia (spread of the organism through the blood). This organism is the major cause of death from eating raw oysters, especially in people with liver damage. It only affects humans and other primates.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_005139:1784000:190982619098261909951126Vibrio vulnificus YJ016 chromosome I, complete sequencehypothetical protein4e-1373.6
NC_016613:1960811:196635719663571966470114Vibrio sp. EJY3 chromosome 1, complete sequencehypothetical protein9e-0752.4
NC_014965:1428902:153420915342091534370162Vibrio vulnificus MO6-24/O chromosome I, complete sequencehypothetical protein5e-0649.7
NC_005139:1784000:188415218841521884286135Vibrio vulnificus YJ016 chromosome I, complete sequencehypothetical protein6e-0649.7
NC_013456:1819421:184026218402621840387126Vibrio sp. Ex25 chromosome 1, complete genomehypothetical protein8e-0648.9