Pre_GI: BLASTP Hits

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Query: NC_005139:1784000:1805053 Vibrio vulnificus YJ016 chromosome I, complete sequence

Start: 1805053, End: 1806414, Length: 1362

Host Lineage: Vibrio vulnificus; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This is a Biotype 1 hospital isolate from Taiwan. It contains larger chromosomes and >1000 genes as compared to Vibrio cholerae and contains a conjugative plasmid, pYJ016. There are numerous virulence factors including a cytolysin, protease, capsular polysaccharide as well as iron-uptake systems encoded in the genome. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Organisms of this species are opportunistic pathogens that can attack immunocompromised patients and causes gastroenteritis (inflammation of mucous membranes of stomach and intestine), wound infections, and primary septicemia (spread of the organism through the blood). This organism is the major cause of death from eating raw oysters, especially in people with liver damage. It only affects humans and other primates.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015637:819233:8280748280748294951422Vibrio anguillarum 775 chromosome chromosome II, complete sequencehypothetical protein2e-88326
NC_007492:6372900:6379696637969663809671272Pseudomonas fluorescens PfO-1, complete genomePutative Adenylate/Guanylate Cyclase2e-49197
NC_010505:4676403:4694314469431446960381725Methylobacterium radiotolerans JCM 2831, complete genomeadenylate/guanylate cyclase2e-0757.8
NC_020453:1785473:1804788180478818065211734Agromonas oligotrophica S58 DNA, complete genomeferredoxin3e-0653.5