Pre_GI: BLASTP Hits

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Query: NC_005126:949226:966523 Photorhabdus luminescens subsp. laumondii TTO1, complete genome

Start: 966523, End: 967746, Length: 1224

Host Lineage: Photorhabdus luminescens; Photorhabdus; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain was isolated on Trinidad and Tobago. It is a symbiont of the nematode Heterorhabditis bacteriophora. Bioluminescent bacterium. This organism is unusual in that it is symbiotic within one insect, and pathogenic in another, the only organism that is known to exhibit this dual phenotype. Enzymes are then released by the bacteria that result in rapid degradation of the insect body, allowing both bacteria and nematode to feed and reproduce. During this period Photorhabdus luminescens releases bacteriocidal products, including antibiotics and bacteriocins, that prevent infection of the larva by competitive microbes. The result is promotion of Photorhabdus luminescens-nematode interactions that result in continuation of the symbiotic relationship. In order to engage in a symbiotic relationship with the nematode and a pathogenic one with the insect larva, the bacterium encodes specific factors that encourage both. These include a large number of genes that code for secreted toxins and enzymes, as well as genes that encode products for the production of antibiotics and bacteriocins. Secretion of these products occurs by an array of systems including type I, type II, and type III secretion systems. The type III system is closely related to the Yersinia plasmid-encoded type III system. Genes that promote symbiotic relationships are also encoded on genomic islands on the chromosome including some that affect nematode development. Virulence genes appear to be active during exponential growth. Symbiotic genes appear to function during stationary phase (post-exponential) growth. The switch from one state to another is controlled. Photorhabdus luminescens is capable of giving off light, a complex process that requires the products of the lux operon.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012962:869295:8809588809588821751218Photorhabdus asymbiotica, complete genomeputative tagatose-6-phosphate ketose/aldose isomerase0728
NC_010338:359940:3599403599403611031164Caulobacter sp. K31, complete genomesugar isomerase (SIS)3e-78292
NC_003485:602640:6230876230876242861200Streptococcus pyogenes MGAS8232, complete genomeputative tagatose-6-phosphate aldose/ketose isomerase4e-71268
NC_010380:124655:1486631486631498291167Streptococcus pneumoniae Hungary19A-6, complete genomeAgaS5e-70265
NC_006155:3596120:3631612363161236327781167Yersinia pseudotuberculosis IP 32953, complete genomeputative phosphosugar isomerase7e-70265
NC_008021:531730:5753605753605765591200Streptococcus pyogenes MGAS9429, complete genomegalactosamine-6-phosphate deaminase (isomerizing)2e-69263
NC_010634:3509880:3545372354537235465381167Yersinia pseudotuberculosis PB1/+, complete genomeAgaS family sugar isomerase5e-69261
NC_015957:7533000:7548380754838075495431164Streptomyces violaceusniger Tu 4113 chromosome, complete genomeAgaS family sugar isomerase2e-68259
NC_008022:556457:5766275766275778261200Streptococcus pyogenes MGAS10270, complete genomeGalactosamine-6-phosphate deaminase (isomerizing)4e-68258
NC_013171:75110:9462994629957621134Anaerococcus prevotii DSM 20548, complete genomesugar isomerase (SIS)8e-62238
NC_012483:971592:9901929901929913761185Acidobacterium capsulatum ATCC 51196, complete genomeputative tagatose-6-phosphate aldose/ketose isomerase3e-52206
NC_014364:1116439:1151186115118611523791194Spirochaeta smaragdinae DSM 11293 chromosome, complete genomesugar isomerase (SIS)2e-49196
NC_016631:1117241:1126793112679311279741182Granulicella mallensis MP5ACTX8 chromosome, complete genomesugar isomerase (SIS)2e-47189
NC_014831:2201246:2210328221032822114011074Thermaerobacter marianensis DSM 12885 chromosome, complete genomeGlutamine--fructose-6-phosphate transaminase (isomerizing)2e-1067.4
NC_004431:1119700:113994111399411140564624Escherichia coli CFT073, complete genomehypothetical protein2e-1067
NC_007946:1073135:109335810933581093981624Escherichia coli UTI89, complete genomehypothetical protein2e-1067