Pre_GI: BLASTP Hits

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Query: NC_005126:892422:893782 Photorhabdus luminescens subsp. laumondii TTO1, complete genome

Start: 893782, End: 894357, Length: 576

Host Lineage: Photorhabdus luminescens; Photorhabdus; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain was isolated on Trinidad and Tobago. It is a symbiont of the nematode Heterorhabditis bacteriophora. Bioluminescent bacterium. This organism is unusual in that it is symbiotic within one insect, and pathogenic in another, the only organism that is known to exhibit this dual phenotype. Enzymes are then released by the bacteria that result in rapid degradation of the insect body, allowing both bacteria and nematode to feed and reproduce. During this period Photorhabdus luminescens releases bacteriocidal products, including antibiotics and bacteriocins, that prevent infection of the larva by competitive microbes. The result is promotion of Photorhabdus luminescens-nematode interactions that result in continuation of the symbiotic relationship. In order to engage in a symbiotic relationship with the nematode and a pathogenic one with the insect larva, the bacterium encodes specific factors that encourage both. These include a large number of genes that code for secreted toxins and enzymes, as well as genes that encode products for the production of antibiotics and bacteriocins. Secretion of these products occurs by an array of systems including type I, type II, and type III secretion systems. The type III system is closely related to the Yersinia plasmid-encoded type III system. Genes that promote symbiotic relationships are also encoded on genomic islands on the chromosome including some that affect nematode development. Virulence genes appear to be active during exponential growth. Symbiotic genes appear to function during stationary phase (post-exponential) growth. The switch from one state to another is controlled. Photorhabdus luminescens is capable of giving off light, a complex process that requires the products of the lux operon.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_020211:103371:120958120958121449492Serratia marcescens WW4, complete genomefimbrial protein MrfE1e-37155
NC_009832:5214850:521485052148505215356507Serratia proteamaculans 568, complete genomeMrfE protein2e-35148
NC_015566:5197624:519762451976245198079456Serratia sp. AS12 chromosome, complete genomeMrfE protein3e-35147
NC_009832:4564752:459564645956464596146501Serratia proteamaculans 568, complete genomeFimbrial protein6e-29127
NC_020211:379000:384360384360384875516Serratia marcescens WW4, complete genomefimbrial protein MrfE1e-28126
NC_021066:4906239:491723949172394917721483Raoultella ornithinolytica B6, complete genomefimbrial protein domain-containing protein9e-27119
NC_016816:3333000:334245533424553342994540Pantoea ananatis LMG 5342, complete genomeexported fimbrial protein4e-25114
NC_009832:4564752:459615745961574596669513Serratia proteamaculans 568, complete genomeMrfE protein2e-24112
NC_020211:103371:121462121462121962501Serratia marcescens WW4, complete genomeputative fimbrial protein3e-22104
NC_005126:892422:894360894360894863504Photorhabdus luminescens subsp. laumondii TTO1, complete genomeMrfF protein6e-2097.1
NC_009832:5214850:521436252143625214853492Serratia proteamaculans 568, complete genomeMrfF protein5e-1890.9
NC_009832:4564752:459668145966814597157477Serratia proteamaculans 568, complete genomeFimbrial protein1e-1789.4
NC_013282:3781149:378955637895563789999444Cronobacter turicensis, complete genomehypothetical protein2e-1789
NC_009832:4564752:459513445951344595562429Serratia proteamaculans 568, complete genomeMrfF protein9e-1580.1
NC_016816:3333000:334185133418513342417567Pantoea ananatis LMG 5342, complete genomeminor fimbrial subunit YfcQ2e-1478.6
NC_013282:3781149:379003537900353790523489Cronobacter turicensis, complete genomehypothetical protein3e-1271.6
NC_009348:4011160:4021269402126940222971029Aeromonas salmonicida subsp. salmonicida A449, complete genometype I pilus assembly protein FimE2e-1065.5
NC_008570:546736:5571695571695582031035Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomefimbrial protein1e-0962.8
NC_020211:379000:384889384889385377489Serratia marcescens WW4, complete genomeputative fimbrial membrane protein3e-0961.2
NC_008253:3122148:313308931330893133607519Escherichia coli 536, complete genomePixF protein1e-0860.1
NC_015424:525039:5351215351215361491029Aeromonas veronii B565 chromosome, complete genometype I pilus assembly protein FimE2e-0858.5
NC_013508:2356865:236612823661282366718591Edwardsiella tarda EIB202, complete genomeP pilus minor tip component PapF5e-0754.3