Pre_GI: BLASTP Hits

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Query: NC_005126:4333767:4365167 Photorhabdus luminescens subsp. laumondii TTO1, complete genome

Start: 4365167, End: 4366054, Length: 888

Host Lineage: Photorhabdus luminescens; Photorhabdus; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain was isolated on Trinidad and Tobago. It is a symbiont of the nematode Heterorhabditis bacteriophora. Bioluminescent bacterium. This organism is unusual in that it is symbiotic within one insect, and pathogenic in another, the only organism that is known to exhibit this dual phenotype. Enzymes are then released by the bacteria that result in rapid degradation of the insect body, allowing both bacteria and nematode to feed and reproduce. During this period Photorhabdus luminescens releases bacteriocidal products, including antibiotics and bacteriocins, that prevent infection of the larva by competitive microbes. The result is promotion of Photorhabdus luminescens-nematode interactions that result in continuation of the symbiotic relationship. In order to engage in a symbiotic relationship with the nematode and a pathogenic one with the insect larva, the bacterium encodes specific factors that encourage both. These include a large number of genes that code for secreted toxins and enzymes, as well as genes that encode products for the production of antibiotics and bacteriocins. Secretion of these products occurs by an array of systems including type I, type II, and type III secretion systems. The type III system is closely related to the Yersinia plasmid-encoded type III system. Genes that promote symbiotic relationships are also encoded on genomic islands on the chromosome including some that affect nematode development. Virulence genes appear to be active during exponential growth. Symbiotic genes appear to function during stationary phase (post-exponential) growth. The switch from one state to another is controlled. Photorhabdus luminescens is capable of giving off light, a complex process that requires the products of the lux operon.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_005126:4333767:434760943476094348520912Photorhabdus luminescens subsp. laumondii TTO1, complete genomehypothetical protein7e-84310
NC_005126:1265071:131050713105071311418912Photorhabdus luminescens subsp. laumondii TTO1, complete genomehypothetical protein7e-84310
NC_005126:4210500:422632542263254227224900Photorhabdus luminescens subsp. laumondii TTO1, complete genomehypothetical protein3e-83308
NC_005126:4210500:423519342351934236086894Photorhabdus luminescens subsp. laumondii TTO1, complete genomehypothetical protein8e-80297
NC_005126:4333767:435497743549774355843867Photorhabdus luminescens subsp. laumondii TTO1, complete genomehypothetical protein2e-74279
NC_012962:3864000:3877461387746138865509090Photorhabdus asymbiotica, complete genomePutative adhesin/hemagglutinin/hemolysin1e-62240
NC_005126:1613818:162829216282921629104813Photorhabdus luminescens subsp. laumondii TTO1, complete genomehypothetical protein2e-62239
NC_012779:3176820:320120932012093201838630Edwardsiella ictaluri 93-146, complete genomehypothetical protein8e-41167
NC_017501:2219803:222955022295502230194645Neisseria meningitidis 8013, complete genome2e-36153
NC_017515:2194500:2202886220288622043821497Neisseria meningitidis M04-240196 chromosome, complete genomeMafB family protein3e-36152
NC_017517:2228000:2238935223893522404311497Neisseria meningitidis M01-240355 chromosome, complete genomeMafB family protein2e-36152
NC_002946:1935186:1947857194785719493531497Neisseria gonorrhoeae FA 1090, complete genomeMafB55e-34144
NC_011035:1876555:1886145188614518876411497Neisseria gonorrhoeae NCCP11945 chromosome, complete genomeprotein MafB56e-34144
NC_014722:467287:491686491686492057372Burkholderia rhizoxinica HKI 454, complete genomeHemolysin2e-29129
NC_014752:197000:2151232151232166551533Neisseria lactamica ST-640, complete genomeMafB adhesin3e-26119
NC_017517:2228000:224552022455202245984465Neisseria meningitidis M01-240355 chromosome, complete genomehypothetical protein8e-26117
NC_014752:933000:9520789520789540451968Neisseria lactamica ST-640, complete genome1e-22107
NC_013592:2160000:217741921774192178270852Dickeya dadantii Ech586, complete genomeParB domain protein nuclease1e-0757.4