Pre_GI: BLASTP Hits

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Query: NC_005126:4333767:4339693 Photorhabdus luminescens subsp. laumondii TTO1, complete genome

Start: 4339693, End: 4340277, Length: 585

Host Lineage: Photorhabdus luminescens; Photorhabdus; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain was isolated on Trinidad and Tobago. It is a symbiont of the nematode Heterorhabditis bacteriophora. Bioluminescent bacterium. This organism is unusual in that it is symbiotic within one insect, and pathogenic in another, the only organism that is known to exhibit this dual phenotype. Enzymes are then released by the bacteria that result in rapid degradation of the insect body, allowing both bacteria and nematode to feed and reproduce. During this period Photorhabdus luminescens releases bacteriocidal products, including antibiotics and bacteriocins, that prevent infection of the larva by competitive microbes. The result is promotion of Photorhabdus luminescens-nematode interactions that result in continuation of the symbiotic relationship. In order to engage in a symbiotic relationship with the nematode and a pathogenic one with the insect larva, the bacterium encodes specific factors that encourage both. These include a large number of genes that code for secreted toxins and enzymes, as well as genes that encode products for the production of antibiotics and bacteriocins. Secretion of these products occurs by an array of systems including type I, type II, and type III secretion systems. The type III system is closely related to the Yersinia plasmid-encoded type III system. Genes that promote symbiotic relationships are also encoded on genomic islands on the chromosome including some that affect nematode development. Virulence genes appear to be active during exponential growth. Symbiotic genes appear to function during stationary phase (post-exponential) growth. The switch from one state to another is controlled. Photorhabdus luminescens is capable of giving off light, a complex process that requires the products of the lux operon.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014541:643604:648788648788649288501Ferrimonas balearica DSM 9799 chromosome, complete genomeprotein of unknown function DUF335 SprT1e-38159
NC_009655:866281:896824896824897336513Actinobacillus succinogenes 130Z chromosome, complete genomehypothetical protein3e-37154
NC_008309:1827809:184889818488981849407510Haemophilus somnus 129PT, complete genomeSprT protein5e-36150
NC_011770:4542183:455732645573264557823498Pseudomonas aeruginosa LESB58, complete genomeputative peptidase, SprT family1e-22106
NC_008463:4342119:435736843573684357865498Pseudomonas aeruginosa UCBPP-PA14, complete genomeputative peptidase, SprT family1e-22106
NC_013889:325118:345171345171345761591Thioalkalivibrio sp. K90mix chromosome, complete genomeprotein of unknown function DUF335 SprT7e-1787