Pre_GI: BLASTP Hits

Some Help

Query: NC_005126:3812054:3818397 Photorhabdus luminescens subsp. laumondii TTO1, complete genome

Start: 3818397, End: 3818924, Length: 528

Host Lineage: Photorhabdus luminescens; Photorhabdus; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain was isolated on Trinidad and Tobago. It is a symbiont of the nematode Heterorhabditis bacteriophora. Bioluminescent bacterium. This organism is unusual in that it is symbiotic within one insect, and pathogenic in another, the only organism that is known to exhibit this dual phenotype. Enzymes are then released by the bacteria that result in rapid degradation of the insect body, allowing both bacteria and nematode to feed and reproduce. During this period Photorhabdus luminescens releases bacteriocidal products, including antibiotics and bacteriocins, that prevent infection of the larva by competitive microbes. The result is promotion of Photorhabdus luminescens-nematode interactions that result in continuation of the symbiotic relationship. In order to engage in a symbiotic relationship with the nematode and a pathogenic one with the insect larva, the bacterium encodes specific factors that encourage both. These include a large number of genes that code for secreted toxins and enzymes, as well as genes that encode products for the production of antibiotics and bacteriocins. Secretion of these products occurs by an array of systems including type I, type II, and type III secretion systems. The type III system is closely related to the Yersinia plasmid-encoded type III system. Genes that promote symbiotic relationships are also encoded on genomic islands on the chromosome including some that affect nematode development. Virulence genes appear to be active during exponential growth. Symbiotic genes appear to function during stationary phase (post-exponential) growth. The switch from one state to another is controlled. Photorhabdus luminescens is capable of giving off light, a complex process that requires the products of the lux operon.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012962:3568046:358586035858603586375516Photorhabdus asymbiotica, complete genomehypothetical protein4e-59226
NC_012962:3568046:359430935943093594890582Photorhabdus asymbiotica, complete genomemembrane protein3e-55214
NC_012962:3568046:359374335937433594258516Photorhabdus asymbiotica, complete genomemembrane protein8e-55212
NC_012962:3568046:359317735931773593692516Photorhabdus asymbiotica, complete genomemembrane protein1e-52205
NC_012962:3568046:358529435852943585809516Photorhabdus asymbiotica, complete genomemembrane protein1e-52205
NC_015663:1:374623746237971510Enterobacter aerogenes KCTC 2190 chromosome, complete genomehypothetical protein2e-46184
NC_011745:258727:268449268449269003555Escherichia coli ED1a chromosome, complete genomehypothetical protein4e-27120
NC_011745:258727:268988268988269530543Escherichia coli ED1a chromosome, complete genomehypothetical protein7e-24109
NC_011745:258727:268144268144268464321Escherichia coli ED1a chromosome, complete genomehypothetical protein2e-23108
NC_020829:1307736:132028713202871320826540Pseudomonas denitrificans ATCC 13867, complete genomehypothetical protein1e-21102
NC_020829:1307736:131819113181911318718528Pseudomonas denitrificans ATCC 13867, complete genomehypothetical protein2e-1995.1
NC_020829:1307736:131661913166191317158540Pseudomonas denitrificans ATCC 13867, complete genomehypothetical protein3e-1994.4
NC_020829:1307736:131871513187151319254540Pseudomonas denitrificans ATCC 13867, complete genomehypothetical protein1e-1789.4
NC_020829:1307736:131609513160951316298204Pseudomonas denitrificans ATCC 13867, complete genomehypothetical protein1e-0755.8
NC_010717:1343000:135681413568141357401588Xanthomonas oryzae pv. oryzae PXO99A, complete genomehypothetical protein4e-0754.3
NC_014931:6031645:604672560467256047210486Variovorax paradoxus EPS chromosome, complete genomehypothetical protein5e-0753.9
NC_020829:1307736:132081113208111321107297Pseudomonas denitrificans ATCC 13867, complete genomehypothetical protein6e-0753.9
NC_020829:1307736:132264413226441322934291Pseudomonas denitrificans ATCC 13867, complete genomehypothetical protein1e-0652.8
NC_020829:1307736:131766713176671317870204Pseudomonas denitrificans ATCC 13867, complete genomehypothetical protein2e-0652.4
NC_020829:1307736:131923913192391319394156Pseudomonas denitrificans ATCC 13867, complete genomehypothetical protein2e-0652.4
NC_014931:6203872:621353662135366214123588Variovorax paradoxus EPS chromosome, complete genomehypothetical protein5e-0650.8
NC_014931:6203872:621414762141476214731585Variovorax paradoxus EPS chromosome, complete genomehypothetical protein8e-0650.1
NC_020829:1307736:131714313171431317265123Pseudomonas denitrificans ATCC 13867, complete genomemembrane protein1e-0549.7