Pre_GI: BLASTP Hits

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Query: NC_005126:142500:154613 Photorhabdus luminescens subsp. laumondii TTO1, complete genome

Start: 154613, End: 154999, Length: 387

Host Lineage: Photorhabdus luminescens; Photorhabdus; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain was isolated on Trinidad and Tobago. It is a symbiont of the nematode Heterorhabditis bacteriophora. Bioluminescent bacterium. This organism is unusual in that it is symbiotic within one insect, and pathogenic in another, the only organism that is known to exhibit this dual phenotype. Enzymes are then released by the bacteria that result in rapid degradation of the insect body, allowing both bacteria and nematode to feed and reproduce. During this period Photorhabdus luminescens releases bacteriocidal products, including antibiotics and bacteriocins, that prevent infection of the larva by competitive microbes. The result is promotion of Photorhabdus luminescens-nematode interactions that result in continuation of the symbiotic relationship. In order to engage in a symbiotic relationship with the nematode and a pathogenic one with the insect larva, the bacterium encodes specific factors that encourage both. These include a large number of genes that code for secreted toxins and enzymes, as well as genes that encode products for the production of antibiotics and bacteriocins. Secretion of these products occurs by an array of systems including type I, type II, and type III secretion systems. The type III system is closely related to the Yersinia plasmid-encoded type III system. Genes that promote symbiotic relationships are also encoded on genomic islands on the chromosome including some that affect nematode development. Virulence genes appear to be active during exponential growth. Symbiotic genes appear to function during stationary phase (post-exponential) growth. The switch from one state to another is controlled. Photorhabdus luminescens is capable of giving off light, a complex process that requires the products of the lux operon.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_003902:3666544:373499937349993735340342Xanthomonas campestris pv. campestris str. ATCC 33913, completehypothetical protein5e-1373.2
NC_008543:259450:265068265068265403336Burkholderia cenocepacia HI2424 chromosome 2, complete sequenceRieske (2Fe-2S) domain protein8e-1372.4
NC_010552:293703:297466297466297801336Burkholderia ambifaria MC40-6 chromosome 2, complete sequenceRieske (2Fe-2S) domain protein9e-1268.9
NC_008391:2253188:225547722554772255812336Burkholderia cepacia AMMD chromosome 2, complete sequenceRieske (2Fe-2S) domain protein5e-1166.2
NC_007511:3080849:309524630952463095581336Burkholderia sp. 383 chromosome 2, complete sequenceRieske (2Fe-2S) protein1e-0961.6
NC_011026:3044717:306165030616503062030381Chloroherpeton thalassium ATCC 35110, complete genomeRieske (2Fe-2S) domain protein6e-0959.7
NC_016147:586433:586433586433586756324Pseudoxanthomonas spadix BD-a59 chromosome, complete genomeRieske (2Fe-2S) iron-sulfur domain-containing protein9e-0958.9
NC_019962:304899:304899304899305447549Natrinema pellirubrum DSM 15624, complete genomeferredoxin subunit of nitrite reductase and ring-hydroxylating dioxygenase6e-0856.2
NC_004463:1898648:191781019178101918193384Bradyrhizobium japonicum USDA 110, complete genomehypothetical protein3e-0753.9
NC_016002:3077648:307920830792083079597390Pseudogulbenkiania sp. NH8B, complete genomeRieske (2Fe-2S) domain containing protein2e-0651.2