Pre_GI: BLASTP Hits

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Query: NC_005126:1265071:1312831 Photorhabdus luminescens subsp. laumondii TTO1, complete genome

Start: 1312831, End: 1313517, Length: 687

Host Lineage: Photorhabdus luminescens; Photorhabdus; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain was isolated on Trinidad and Tobago. It is a symbiont of the nematode Heterorhabditis bacteriophora. Bioluminescent bacterium. This organism is unusual in that it is symbiotic within one insect, and pathogenic in another, the only organism that is known to exhibit this dual phenotype. Enzymes are then released by the bacteria that result in rapid degradation of the insect body, allowing both bacteria and nematode to feed and reproduce. During this period Photorhabdus luminescens releases bacteriocidal products, including antibiotics and bacteriocins, that prevent infection of the larva by competitive microbes. The result is promotion of Photorhabdus luminescens-nematode interactions that result in continuation of the symbiotic relationship. In order to engage in a symbiotic relationship with the nematode and a pathogenic one with the insect larva, the bacterium encodes specific factors that encourage both. These include a large number of genes that code for secreted toxins and enzymes, as well as genes that encode products for the production of antibiotics and bacteriocins. Secretion of these products occurs by an array of systems including type I, type II, and type III secretion systems. The type III system is closely related to the Yersinia plasmid-encoded type III system. Genes that promote symbiotic relationships are also encoded on genomic islands on the chromosome including some that affect nematode development. Virulence genes appear to be active during exponential growth. Symbiotic genes appear to function during stationary phase (post-exponential) growth. The switch from one state to another is controlled. Photorhabdus luminescens is capable of giving off light, a complex process that requires the products of the lux operon.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_005126:1613818:161819316181931618849657Photorhabdus luminescens subsp. laumondii TTO1, complete genomehypothetical protein2e-33142
NC_012962:1661683:167880016788001679423624Photorhabdus asymbiotica, complete genomesimilar to haemagluttinin from E.coli-cdia6e-33140
NC_005126:4333767:434091043409104341191282Photorhabdus luminescens subsp. laumondii TTO1, complete genomehypothetical protein4e-30131
NC_013508:876431:9017899017899093907602Edwardsiella tarda EIB202, complete genomehypothetical protein1e-27123
NC_012779:3176820:3207242320724232135146273Edwardsiella ictaluri 93-146, complete genomefilamentous hemagglutinin, N-:Adhesin HecA 20-residue repeat x23e-1891.7
NC_012962:1661683:167643916764391676888450Photorhabdus asymbiotica, complete genomeputative haemagglutinin cdia2e-1479
NC_014306:1981956:2006198200619820083692172Erwinia billingiae Eb661, complete genomePutative hemolysin3e-1478.6
NC_005126:4333767:4356175435617543571821008Photorhabdus luminescens subsp. laumondii TTO1, complete genomehypothetical protein4e-1168.2
NC_015566:4662171:4671740467174046732151476Serratia sp. AS12 chromosome, complete genomehypothetical protein1e-0963.2
NC_009708:1735903:1762407176240717701737767Yersinia pseudotuberculosis IP 31758 chromosome, complete genomehemagglutinin/adhesin repeat-containing protein1e-0860.5
NC_005126:4333767:434068643406864340955270Photorhabdus luminescens subsp. laumondii TTO1, complete genomehypothetical protein5e-0857.8
NC_014306:1981956:200360820036082004204597Erwinia billingiae Eb661, complete genomehypothetical protein1e-0653.1
NC_005126:1265071:130190313019031302790888Photorhabdus luminescens subsp. laumondii TTO1, complete genomehypothetical protein7e-0650.8