Pre_GI: BLASTP Hits

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Query: NC_004851:157675:177797 Shigella flexneri 2a str. 301 plasmid pCP301, complete sequence

Start: 177797, End: 178072, Length: 276

Host Lineage: Shigella flexneri; Shigella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain was isolated in 1984 from a patient in Beijing, China. Causes enteric disease. This genus is named for the Japanese scientist (Shiga) who discovered them in the 1890s. They are closely related to the Escherichia group, and may be considered the same species. Transmitted via contaminated food and water and are the leading causes of endemic bacillary dysentery, and over 1 million deaths worldwide are attributed to them. The bacteria infect the epithelial lining of the colon, causing acute inflammation by entering the host cell cytoplasm and spreading intercellularly. are extremely virulent organisms that require very few cells in order to cause disease. Both the type III secretion system, which delivers effector molecules into the host cell, and some of the translocated effectors such as the invasion plasmid antigens (Ipas), are encoded on the plasmid. The bacterium produces a surface protein that localizes to one pole of the cell (IcsA) which binds to and promotes actin polymerization, resulting in movement of the bacterium through the cell cytoplasm, and eventually to neighboring cells, which results in inflammatory destruction of the mucosal lining. This organism, along with Shigella sonnei, is the major cause of shigellosis in industrialized countries and is responsible for endemic infections.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009787:17344:253552535525630276Escherichia coli E24377A plasmid pETEC_35, complete sequenceplasmid stabilization system protein, RelE/ParE family5e-46182
NC_009837:92000:926309263092905276Escherichia coli APEC O1 plasmid pAPEC-O1-ColBM, complete sequencehypothetical protein8e-46182
NC_016860:4024000:403749640374964037771276Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein2e-45180
NC_010678:642769:644653644653644928276Ralstonia pickettii 12J chromosome 2, complete sequenceplasmid stabilization system5e-33139
NC_013971:3296272:330235033023503302625276Erwinia amylovora ATCC 49946 chromosome, complete genomeplasmid-like protein5e-1786.3
NC_013961:441719:468675468675468950276Erwinia amylovora, complete genomehypothetical protein5e-1786.3
NC_009436:522649:544609544609544884276Enterobacter sp. 638, complete genomeplasmid stabilization system protein5e-1786.3
NC_004547:442927:466819466819467094276Erwinia carotovora subsp. atroseptica SCRI1043, complete genomeputative plasmid-related protein6e-1786.3
NC_020063:528296:547974547974548249276Enterobacteriaceae bacterium strain FGI 57, complete genomePlasmid stabilization system protein3e-1373.6