Pre_GI: BLASTP Hits

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Query: NC_004631:799810:812460 Salmonella enterica subsp. enterica serovar Typhi Ty2, complete

Start: 812460, End: 813062, Length: 603

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This pathogenic strain of Salmonella typhi was isolated in the early 1970s. It contains no multidrug resistance plasmids and has been used for vaccine development. This serovar is a human-specific organism that causes the life-threatening illness Typhoid fever which is acquired by coming into contact with contaminated food or water. Annually, 17 million people are infected, with 600,000 fatalities, mostly in developing countries. It contains multiple fimbrial operons that may be used to create extracellular appendages for attachment and entry into host intestinal epithelial cells. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016832:799764:812414812414813016603Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein2e-105381
NC_003198:2179688:219087421908742191476603Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein2e-105381
NC_011149:2179592:219079421907942191396603Salmonella enterica subsp. enterica serovar Agona str. SL483,hypothetical protein3e-102370
NC_011147:792489:805207805207805809603Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein2e-101368
NC_006511:792543:805261805261805863603Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCChypothetical protein2e-101368
NC_013282:2026083:206150920615092062138630Cronobacter turicensis, complete genomehypothetical protein1e-45182
NC_013971:465318:472932472932473495564Erwinia amylovora ATCC 49946 chromosome, complete genomehypothetical protein7e-39160
NC_009648:3476000:349251134925113493107597Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomehypothetical protein5e-38157
NC_008563:3119284:314267231426723143301630Escherichia coli APEC O1, complete genomehypothetical protein6e-33140
NC_011742:3057444:305744430574443058085642Escherichia coli S88 chromosome, complete genomehypothetical protein6e-33140
NC_007946:3125577:312557731255773126218642Escherichia coli UTI89, complete genomehypothetical protein6e-33140
NC_012962:293976:295761295761296453693Photorhabdus asymbiotica, complete genomehypothetical protein4e-0651.2