Pre_GI: BLASTP Hits

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Query: NC_004631:2842453:2852296 Salmonella enterica subsp. enterica serovar Typhi Ty2, complete

Start: 2852296, End: 2852874, Length: 579

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This pathogenic strain of Salmonella typhi was isolated in the early 1970s. It contains no multidrug resistance plasmids and has been used for vaccine development. This serovar is a human-specific organism that causes the life-threatening illness Typhoid fever which is acquired by coming into contact with contaminated food or water. Annually, 17 million people are infected, with 600,000 fatalities, mostly in developing countries. It contains multiple fimbrial operons that may be used to create extracellular appendages for attachment and entry into host intestinal epithelial cells. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016832:2829767:283959528395952840173579Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Oxygen-regulated invasion protein orgA7e-97352
NC_003198:2856596:286643928664392867017579Salmonella enterica subsp. enterica serovar Typhi str. CT18,cell invasion protein7e-97352
NC_003197:3005842:301442530144253015024600Salmonella typhimurium LT2, complete genomeneedle complex assembly protein4e-96350
NC_011274:2881306:288988928898892890488600Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91cell invasion protein4e-96350
NC_011294:2890500:289908428990842899683600Salmonella enterica subsp. enterica serovar Enteritidis strcell invasion protein4e-96350
NC_016810:3028421:303700130370013037600600Salmonella enterica subsp. enterica serovar Typhimurium stroxygen-regulated invasion protein4e-96350
NC_016856:3026426:303466230346623035261600Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sneedle complex assembly protein4e-96350
NC_016857:3028421:303700130370013037600600Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74needle complex assembly protein4e-96350
NC_016863:2974333:298291529829152983514600Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1needle complex assembly protein4e-96350
NC_006905:2960260:296795229679522968530579Salmonella enterica subsp. enterica serovar Choleraesuis strputative inner membrane protein6e-96349
NC_006511:2819128:282897128289712829549579Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCoxygen-regulated invasion protein6e-96349
NC_010102:2967464:297740729774072977985579Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein6e-96349
NC_011083:2980356:298893929889392989517579Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,type III secretion apparatus protein OrgA/MxiK6e-96349
NC_011147:2814664:282450728245072825085579Salmonella enterica subsp. enterica serovar Paratyphi A stroxygen-regulated invasion protein6e-96349
NC_011205:3050235:305881630588163059394579Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853type III secretion apparatus protein OrgA/MxiK6e-96349
NC_016831:2867766:287634828763482876926579Salmonella enterica subsp. enterica serovar Gallinarum/pullorumcell invasion protein6e-96349
NC_016860:3029272:303785530378553038433579Salmonella enterica subsp. enterica serovar Typhimurium strcell invasion protein6e-96349
NC_011080:2982346:299092929909292991507579Salmonella enterica subsp. enterica serovar Newport str. SL254,type III secretion apparatus protein OrgA/MxiK1e-95348
NC_011149:2912219:292295329229532923531579Salmonella enterica subsp. enterica serovar Agona str. SL483,type III secretion apparatus protein OrgA/MxiK1e-95348
NC_011094:2913500:292163129216312922209579Salmonella enterica subsp. enterica serovar Schwarzengrund strtype III secretion apparatus protein OrgA/MxiK1e-95348
NC_010067:84093:9949199491100069579Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein7e-86316
NC_015761:2726000:273465427346542735253600Salmonella bongori NCTC 12419, complete genomecell invasion protein5e-83306
NC_017046:3027161:303574130357413036244504Salmonella enterica subsp. enterica serovar Typhimurium str. 798oxygen-regulated invasion protein4e-80296
NC_012125:2938519:294833629483362948839504Salmonella enterica subsp. enterica serovar Paratyphi C strainoxygen-regulated invasion protein4e-80296
NC_013008:3761467:377773037777303778311582Escherichia coli O157:H7 str. TW14359 chromosome, complete genomehypothetical protein3e-1168.2
NC_002695:3702344:371860737186073719188582Escherichia coli O157:H7 str. Sakai, complete genomehypothetical protein3e-1168.2
NC_011751:3285646:330283233028323303413582Escherichia coli UMN026 chromosome, complete genomehypothetical protein4e-1167.8
CU928160:3030324:304726530472653047846582Escherichia coli IAI1 chromosome, complete genomeconserved hypothetical protein1e-0756.6
NC_011741:3030324:304726530472653047846582Escherichia coli IAI1 chromosome, complete genomehypothetical protein1e-0756.6
NC_013364:3552284:356923135692313569812582Escherichia coli O111:H- str. 11128, complete genomehypothetical protein2e-0755.5
NC_013361:3867558:388449938844993885080582Escherichia coli O26:H11 str. 11368 chromosome, complete genomehypothetical protein2e-0755.5
NC_013353:3474077:349101734910173491598582Escherichia coli O103:H2 str. 12009, complete genomehypothetical protein2e-0755.5
AP010958:3474077:349101734910173491598582Escherichia coli O103:H2 str. 12009 DNA, complete genomehypothetical protein2e-0755.5
CU928145:3196173:321311432131143213695582Escherichia coli 55989 chromosome, complete genomeconserved hypothetical protein2e-0755.5
NC_011748:3196173:321311432131143213695582Escherichia coli 55989, complete genomehypothetical protein2e-0755.5
NC_011415:3217796:323473732347373235318582Escherichia coli SE11 chromosome, complete genomehypothetical protein3e-0754.7
NC_010468:906957:923931923931924512582Escherichia coli ATCC 8739, complete genome2e-0652