Pre_GI: BLASTP Hits

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Query: NC_004631:2842453:2851668 Salmonella enterica subsp. enterica serovar Typhi Ty2, complete

Start: 2851668, End: 2852339, Length: 672

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This pathogenic strain of Salmonella typhi was isolated in the early 1970s. It contains no multidrug resistance plasmids and has been used for vaccine development. This serovar is a human-specific organism that causes the life-threatening illness Typhoid fever which is acquired by coming into contact with contaminated food or water. Annually, 17 million people are infected, with 600,000 fatalities, mostly in developing countries. It contains multiple fimbrial operons that may be used to create extracellular appendages for attachment and entry into host intestinal epithelial cells. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016832:2829767:283896728389672839638672Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Oxygen-regulated invasion protein orgB2e-130464
NC_003198:2856596:286581128658112866482672Salmonella enterica subsp. enterica serovar Typhi str. CT18,cell invasion protein2e-130464
NC_011147:2814664:282387928238792824550672Salmonella enterica subsp. enterica serovar Paratyphi A stroxygen-regulated invasion protein5e-130462
NC_011094:2913500:292100329210032921674672Salmonella enterica subsp. enterica serovar Schwarzengrund strinvasion protein OrgB5e-130462
NC_011149:2912219:292232529223252922996672Salmonella enterica subsp. enterica serovar Agona str. SL483,5e-130462
NC_006511:2819128:282834328283432829014672Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCoxygen-regulated invasion protein5e-130462
NC_011274:2881306:288925228892522889932681Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91cell invasion protein1e-129461
NC_011205:3050235:305817930581793058859681Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853oxygen-regulated invasion protein OrgB1e-129461
NC_003197:3005842:301378830137883014468681Salmonella typhimurium LT2, complete genomeneedle complex export protein1e-129461
NC_006905:2960260:296731529673152967995681Salmonella enterica subsp. enterica serovar Choleraesuis strputative flagellar biosynthesis/type III secretory pathway protein1e-129461
NC_011083:2980356:298830229883022988982681Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,oxygen-regulated invasion protein OrgB1e-129461
NC_011080:2982346:299029229902922990972681Salmonella enterica subsp. enterica serovar Newport str. SL254,oxygen-regulated invasion protein OrgB1e-129461
NC_011294:2890500:289844728984472899127681Salmonella enterica subsp. enterica serovar Enteritidis strcell invasion protein1e-129461
NC_012125:2938519:294769929476992948379681Salmonella enterica subsp. enterica serovar Paratyphi C strainoxygen-regulated invasion protein1e-129461
NC_016810:3028421:303636430363643037044681Salmonella enterica subsp. enterica serovar Typhimurium stroxygen-regulated invasion protein1e-129461
NC_017046:3027161:303510430351043035784681Salmonella enterica subsp. enterica serovar Typhimurium str. 798oxygen-regulated invasion protein1e-129461
NC_016863:2974333:298227829822782982958681Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1needle complex export protein1e-129461
NC_016860:3029272:303721830372183037898681Salmonella enterica subsp. enterica serovar Typhimurium stroxygen-regulated invasion protein1e-129461
NC_016857:3028421:303636430363643037044681Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74needle complex export protein1e-129461
NC_016856:3026426:303402530340253034705681Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sneedle complex export protein1e-129461
NC_016831:2867766:287571128757112876391681Salmonella enterica subsp. enterica serovar Gallinarum/pullorumcell invasion protein1e-129461
NC_010067:84093:100026100026100697672Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein2e-127454
NC_015761:2726000:273402627340262734697672Salmonella bongori NCTC 12419, complete genomecell invasion protein2e-124444
NC_010102:2967464:297677029767702977282513Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein3e-96350
NC_011751:3285646:330218333021833302953771Escherichia coli UMN026 chromosome, complete genomehypothetical protein1e-0859.7