Pre_GI: BLASTP Hits

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Query: NC_004631:1182883:1187422 Salmonella enterica subsp. enterica serovar Typhi Ty2, complete

Start: 1187422, End: 1188231, Length: 810

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This pathogenic strain of Salmonella typhi was isolated in the early 1970s. It contains no multidrug resistance plasmids and has been used for vaccine development. This serovar is a human-specific organism that causes the life-threatening illness Typhoid fever which is acquired by coming into contact with contaminated food or water. Annually, 17 million people are infected, with 600,000 fatalities, mostly in developing countries. It contains multiple fimbrial operons that may be used to create extracellular appendages for attachment and entry into host intestinal epithelial cells. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016832:1182496:118639411863941187203810Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein2e-154544
NC_003198:1771432:179290117929011793710810Salmonella enterica subsp. enterica serovar Typhi str. CT18,putative regulator2e-154544
NC_014121:1589389:162078716207871621596810Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completeputative transcriptional regulator4e-134477
NC_021066:839734:875912875912876724813Raoultella ornithinolytica B6, complete genomehypothetical protein4e-127454
NC_013508:1491945:151879715187971519666870Edwardsiella tarda EIB202, complete genomeputative transcriptional regulator8e-77286
NC_014012:3812754:381576138157613816549789Shewanella violacea DSS12, complete genomehypothetical protein2e-1996.3
NC_009659:2849000:285295628529562853795840Janthinobacterium sp. Marseille chromosome, complete genomehypothetical protein3e-1892
NC_002488:1430680:144215214421521443039888Xylella fastidiosa 9a5c, complete genomehypothetical protein9e-1684.3
NC_019757:5085648:510678951067895107613825Cylindrospermum stagnale PCC 7417, complete genomehypothetical protein3e-1375.9
NC_020209:397376:403206403206404009804Pseudomonas poae RE*1-1-14, complete genomehypothetical protein6e-1064.7
NC_010501:908000:912136912136912942807Pseudomonas putida W619, complete genomehypothetical protein5e-0961.6
NC_015677:2939301:296382729638272964678852Ramlibacter tataouinensis TTB310 chromosome, complete genomehypothetical protein4e-0858.9
NC_008027:4889662:491750149175014918307807Pseudomonas entomophila L48, complete genomehypothetical protein5e-0755.1