Pre_GI: BLASTP Hits

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Query: NC_004605:1092476:1109834 Vibrio parahaemolyticus RIMD 2210633 chromosome II, complete

Start: 1109834, End: 1110448, Length: 615

Host Lineage: Vibrio parahaemolyticus; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This is a clinical strain isolated in 1996 in Osaka, Japan. It contains a type III secretion system which may enable colonization and penetration of the host intestinal epithelial layer, and possibly lead to septicemia. The genome contains multipe chromosomal rearrangements as compared to Vibrio cholerae. The organism also produces a hemolysin (thermostable direct hemolysin - TDH) that is particular to Vibrio parahaemolyticus. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. This species causes food poisoning (gastroenteritis) in countries that have elevated levels of seafood consumption such as Japan.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011365:1171536:119364611936461194278633Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genomeglutathione S-transferase domain-containing protein9e-26116
NC_008758:143907:145791145791146423633Polaromonas naphthalenivorans CJ2 plasmid pPNAP02, completeGlutathione S-transferase, C-terminal domain6e-24110
NC_008740:443274:482112482112482732621Marinobacter aquaeolei VT8, complete genomeGlutathione S-transferase, N-terminal domain1e-23109
NC_016147:1672482:167806016780601678680621Pseudoxanthomonas spadix BD-a59 chromosome, complete genomeglutathione S-transferase domain-containing protein2e-22105
NC_008750:2332000:234501823450182345638621Shewanella sp. W3-18-1, complete genomeGlutathione S-transferase, N-terminal domain9e-2096.7
NC_015850:1947000:197042919704291971034606Acidithiobacillus caldus SM-1 chromosome, complete genomeglutathione S-transferase4e-1891.3
NC_017506:1507943:151045415104541511050597Marinobacter adhaerens HP15 chromosome, complete genomeglutathione S-transferase family protein1e-1480.1
NC_020209:2119845:214373521437352144574840Pseudomonas poae RE*1-1-14, complete genomeputative glutathione-S transferase1e-1479.7
NC_011001:568970:569691569691570383693Burkholderia cenocepacia J2315 chromosome 2, complete sequenceglutathione S-transferase3e-1478.6
NC_007912:4364215:437041643704164371060645Saccharophagus degradans 2-40, complete genomeglutathione S-transferase family protein5e-1477.8
NC_011761:2457560:246556424655642466445882Acidithiobacillus ferrooxidans ATCC 23270 chromosome, completeglutathione S-transferase2e-1375.9
NC_014840:205723:257140257140257757618Pantoea sp. At-9b plasmid pPAT9B03, complete sequenceglutathione S-transferase domain-containing protein6e-1373.9
NC_009656:3733913:374744537474453748047603Pseudomonas aeruginosa PA7 chromosome, complete genomeputative glutathione S-transferase7e-1373.6
NC_013440:1698047:171011717101171710752636Haliangium ochraceum DSM 14365, complete genomeGlutathione S-transferase domain protein9e-1373.6
NC_003910:2588000:260967226096722610286615Colwellia psychrerythraea 34H, complete genomeputative glutathione S-transferase4e-1271.2
NC_010170:3908500:393866839386683939300633Bordetella petrii, complete genomeglutathione S-transferase family protein4e-1271.2
NC_007912:4364215:436811643681164368772657Saccharophagus degradans 2-40, complete genomeputative glutathione S-transferase6e-1270.9
NC_010501:1286971:130797513079751308598624Pseudomonas putida W619, complete genomeGlutathione S-transferase domain5e-1270.9
NC_014315:3319865:139541395414604651Nitrosococcus watsoni C-113 chromosome, complete genomeGlutathione S-transferase domain-containing protein1e-1169.7
NC_008254:2728693:272995827299582730569612Mesorhizobium sp. BNC1, complete genomeglutathione S-transferase-like1e-1169.7
NC_010725:4035397:406989140698914070502612Methylobacterium populi BJ001, complete genomeGlutathione S-transferase domain2e-1169.3
NC_010170:1551923:156812915681291568749621Bordetella petrii, complete genomeputative glutathione transferase3e-1168.6
NC_010510:310938:318104318104318802699Methylobacterium radiotolerans JCM 2831 plasmid pMRAD01, completeGlutathione S-transferase domain protein3e-1168.6
NC_009512:3118907:313525131352513136093843Pseudomonas putida F1, complete genomeGlutathione S-transferase, C-terminal domain7e-1167.4
NC_013456:1843000:185798118579811858577597Vibrio sp. Ex25 chromosome 1, complete genomeglutathione transferase9e-1167
NC_005773:694990:714330714330715172843Pseudomonas syringae pv. phaseolicola 1448A, complete genomeglutathione S-transferase family protein1e-1066.6
NC_010681:1234500:124405312440531244664612Burkholderia phytofirmans PsJN chromosome 1, complete sequenceGlutathione S-transferase domain1e-1066.2
NC_015684:1343251:135598013559801356600621Oligotropha carboxidovorans OM5 chromosome, complete genomeglutathione S-transferase GstA2e-1065.9
NC_011386:2762886:276782927678292768449621Oligotropha carboxidovorans OM5, complete genomeglutathione S-transferase protein2e-1065.9
NC_008758:143907:144864144864145745882Polaromonas naphthalenivorans CJ2 plasmid pPNAP02, completeGlutathione S-transferase, C-terminal domain2e-1065.9
NC_014924:3065430:306865330686533069339687Pseudoxanthomonas suwonensis 11-1 chromosome, complete genomeGlutathione S-transferase domain2e-1065.5
NC_010162:7571525:759098575909857591608624Sorangium cellulosum 'So ce 56', complete genomehypothetical protein5e-1064.3
NC_012791:721813:722888722888723499612Variovorax paradoxus S110 chromosome 1, complete genomeGlutathione S-transferase domain protein6e-1063.9
NC_009720:3281000:329760932976093298493885Xanthobacter autotrophicus Py2, complete genomeglutathione S-transferase domain-containing protein6e-1063.9
NC_010170:3908500:393805739380573938671615Bordetella petrii, complete genomeglutathione S-transferase family protein9e-1063.5
NC_010546:1175979:117775911777591178370612Cyanothece sp. ATCC 51142 chromosome circular, complete sequenceglutathione S-transferase1e-0963.5
NC_007778:2875973:287771028777102878585876Rhodopseudomonas palustris HaA2, complete genomeGlutathione S-transferase-like2e-0962.8
NC_005125:4557889:457793545779354578576642Gloeobacter violaceus PCC 7421, complete genomehypothetical protein2e-0962.8
NC_010170:4739925:476091647609164761599684Bordetella petrii, complete genomehypothetical protein2e-0962
NC_015410:3502099:350894435089443509783840Pseudomonas mendocina NK-01 chromosome, complete genomeputative glutathione S-transferase YghU4e-0961.6
NC_010170:3908500:393735739373573938016660Bordetella petrii, complete genomeProbable glutathione S-transferase5e-0961.2
NC_007604:2213659:222360222236022224213612Synechococcus elongatus PCC 7942, complete genomeprobable glutathione S-transferase4e-0961.2
NC_006576:2073163:209281720928172093428612Synechococcus elongatus PCC 6301, complete genomeprobable glutathione S-transferase4e-0961.2
NC_012988:2541941:256305025630502563823774Methylobacterium extorquens DM4, complete genomedichloromethane dehalogenase2e-0859.3
NC_014623:9492000:951222595122259512827603Stigmatella aurantiaca DW4/3-1 chromosome, complete genomeglutathione s-transferase5e-0857.8
NC_010102:2178594:218306821830682183694627Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein6e-0857.4
NC_016626:1699500:172238117223811723085705Burkholderia sp. YI23 plasmid byi_1p, complete sequenceglutathione S-transferase8e-0857
NC_009720:3281000:329687432968743297578705Xanthobacter autotrophicus Py2, complete genomeglutathione S-transferase domain-containing protein1e-0756.6
NC_014837:1873020:190557219055721906180609Pantoea sp. At-9b chromosome, complete genomeglutathione S-transferase domain-containing protein2e-0756.2
NC_011094:973140:987757987757988383627Salmonella enterica subsp. enterica serovar Schwarzengrund strglutathione S-transferase family protein2e-0755.8
NC_016147:1825827:183848518384851839096612Pseudoxanthomonas spadix BD-a59 chromosome, complete genomeglutathione S-transferase2e-0755.5
NC_006905:946418:962374962374963000627Salmonella enterica subsp. enterica serovar Choleraesuis strputative glutathione S-transferase3e-0755.1
NC_012125:894955:909578909578910204627Salmonella enterica subsp. enterica serovar Paratyphi C strainglutathione s-transferase family protein3e-0755.1
NC_003197:920000:934627934627935253627Salmonella typhimurium LT2, complete genomeputative glutathione S-transferase3e-0755.1
NC_011083:967260:981894981894982520627Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,glutathione S-transferase family protein3e-0755.1
NC_016810:919266:933888933888934514627Salmonella enterica subsp. enterica serovar Typhimurium strglutathione s-transferase family protein3e-0755.1
NC_016856:921057:935679935679936305627Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative glutathione S-transferase3e-0755.1
NC_016857:919266:933888933888934514627Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74glutathione s-transferase family protein3e-0755.1
NC_016860:959609:974231974231974857627Salmonella enterica subsp. enterica serovar Typhimurium strputative glutathione S-transferase3e-0755.1
NC_016863:920346:934968934968935594627Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative glutathione S-transferase3e-0755.1
NC_017046:919249:933870933870934496627Salmonella enterica subsp. enterica serovar Typhimurium str. 798glutathione s-transferase family protein3e-0755.1
NC_014837:1873020:190724919072491907875627Pantoea sp. At-9b chromosome, complete genomeglutathione S-transferase domain-containing protein4e-0754.7
NC_014664:1669642:168575816857581686453696Rhodomicrobium vannielii ATCC 17100 chromosome, complete genomeGlutathione S-transferase domain protein4e-0754.7
NC_007347:1596040:160861316086131609251639Ralstonia eutropha JMP134 chromosome 1, complete sequenceGlutathione S-transferase, N-terminal:Glutathione S-transferase, C-terminal4e-0754.7
NC_014500:2019113:202759220275922028266675Dickeya dadantii 3937 chromosome, complete genomeglutathione S-transferase, theta5e-0754.3
NC_009832:1664238:166811016681101668817708Serratia proteamaculans 568, complete genomeGlutathione S-transferase domain2e-0652.8