Pre_GI: BLASTP Hits

Some Help

Query: NC_004603:1897532:1933966 Vibrio parahaemolyticus RIMD 2210633 chromosome I, complete

Start: 1933966, End: 1934565, Length: 600

Host Lineage: Vibrio parahaemolyticus; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This is a clinical strain isolated in 1996 in Osaka, Japan. It contains a type III secretion system which may enable colonization and penetration of the host intestinal epithelial layer, and possibly lead to septicemia. The genome contains multipe chromosomal rearrangements as compared to Vibrio cholerae. The organism also produces a hemolysin (thermostable direct hemolysin - TDH) that is particular to Vibrio parahaemolyticus. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. This species causes food poisoning (gastroenteritis) in countries that have elevated levels of seafood consumption such as Japan.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011898:3367457:336906333690633370061999Clostridium cellulolyticum H10, complete genomehypothetical protein2e-51202
NC_015500:78223:899918999190818828Treponema brennaborense DSM 12168 chromosome, complete genomehypothetical protein4e-48190
NC_018867:10238:689926899269297306Dehalobacter sp. CF chromosome, complete genomehypothetical protein1e-21103
NC_014759:2438492:246071324607132461261549Marivirga tractuosa DSM 4126 chromosome, complete genomehypothetical protein5e-0650.8