Pre_GI: BLASTP Hits

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Query: NC_004603:1897532:1930441 Vibrio parahaemolyticus RIMD 2210633 chromosome I, complete

Start: 1930441, End: 1930683, Length: 243

Host Lineage: Vibrio parahaemolyticus; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This is a clinical strain isolated in 1996 in Osaka, Japan. It contains a type III secretion system which may enable colonization and penetration of the host intestinal epithelial layer, and possibly lead to septicemia. The genome contains multipe chromosomal rearrangements as compared to Vibrio cholerae. The organism also produces a hemolysin (thermostable direct hemolysin - TDH) that is particular to Vibrio parahaemolyticus. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. This species causes food poisoning (gastroenteritis) in countries that have elevated levels of seafood consumption such as Japan.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_004603:1897532:192937219293721929656285Vibrio parahaemolyticus RIMD 2210633 chromosome I, completehypothetical protein3e-34143
NC_014965:1428902:146779714677971468081285Vibrio vulnificus MO6-24/O chromosome I, complete sequencehypothetical protein5e-33139
NC_012926:2047303:206763920676392067974336Streptococcus suis BM407 chromosome, complete genomehypothetical protein1e-0652
NC_012924:1997052:201731220173122017647336Streptococcus suis SC84, complete genomehypothetical protein1e-0652
NC_009443:1996812:201706820170682017403336Streptococcus suis 98HAH33, complete genomehypothetical protein1e-0652
NC_012925:1912429:192890519289051929240336Streptococcus suis P1/7, complete genomehypothetical protein1e-0652