Pre_GI: BLASTP Hits

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Query: NC_004603:1897532:1926537 Vibrio parahaemolyticus RIMD 2210633 chromosome I, complete

Start: 1926537, End: 1927358, Length: 822

Host Lineage: Vibrio parahaemolyticus; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This is a clinical strain isolated in 1996 in Osaka, Japan. It contains a type III secretion system which may enable colonization and penetration of the host intestinal epithelial layer, and possibly lead to septicemia. The genome contains multipe chromosomal rearrangements as compared to Vibrio cholerae. The organism also produces a hemolysin (thermostable direct hemolysin - TDH) that is particular to Vibrio parahaemolyticus. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. This species causes food poisoning (gastroenteritis) in countries that have elevated levels of seafood consumption such as Japan.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015703:3880903:390036239003623901222861Runella slithyformis DSM 19594 chromosome, complete genomephospholipase D/transphosphatidylase6e-1168.2
NC_010981:242500:275469275469275975507Wolbachia pipientis, complete genomePutative endonuclease2e-0963.2
NC_007626:2204767:223328122332812233814534Magnetospirillum magneticum AMB-1, complete genomePhosphatidylserine/phosphatidylglycerophosphate/ cardioli pin synthase and related enzyme6e-0961.6
NC_000963:1024000:102753810275381028155618Rickettsia prowazekii str. Madrid E, complete genomehypothetical protein4e-0858.5
NC_017048:225980:257960257960258577618Rickettsia prowazekii str. GvV257 chromosome, complete genomehypothetical protein4e-0858.5
NC_017049:1022000:102580710258071026424618Rickettsia prowazekii str. Chernikova chromosome, complete genomehypothetical protein4e-0858.5
NC_017050:1024000:102745710274571028074618Rickettsia prowazekii str. Katsinyian chromosome, complete genomehypothetical protein4e-0858.5
NC_017056:995500:102744810274481028065618Rickettsia prowazekii str. BuV67-CWPP chromosome, complete genomehypothetical protein4e-0858.5
NC_017057:1024000:102811410281141028731618Rickettsia prowazekii str. RpGvF24 chromosome, complete genomehypothetical protein4e-0858.5
NC_010981:468465:484125484125484667543Wolbachia pipientis, complete genomePutative endonuclease protein7e-0857.8
NC_010981:1371265:141388014138801414506627Wolbachia pipientis, complete genomePutative endonuclease9e-0754.3