Pre_GI: BLASTP Hits

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Query: NC_004603:1897532:1923237 Vibrio parahaemolyticus RIMD 2210633 chromosome I, complete

Start: 1923237, End: 1923536, Length: 300

Host Lineage: Vibrio parahaemolyticus; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This is a clinical strain isolated in 1996 in Osaka, Japan. It contains a type III secretion system which may enable colonization and penetration of the host intestinal epithelial layer, and possibly lead to septicemia. The genome contains multipe chromosomal rearrangements as compared to Vibrio cholerae. The organism also produces a hemolysin (thermostable direct hemolysin - TDH) that is particular to Vibrio parahaemolyticus. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. This species causes food poisoning (gastroenteritis) in countries that have elevated levels of seafood consumption such as Japan.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_006513:881120:910243910243910500258Azoarcus sp. EbN1, complete genomeantitoxin of toxin-antitoxin stability system6e-25112
NC_008609:2643000:264688526468852647139255Pelobacter propionicus DSM 2379, complete genomeprevent-host-death family protein2e-22104
NC_010529:23775:462554625546518264Cupriavidus taiwanensis plasmid pRALTA, complete sequenceantitoxin of the YoeB-YefM toxin-antitoxin system1e-1892
NC_016109:4088259:409787140978714098149279Kitasatospora setae KM-6054, complete genomeputative antitoxin2e-1684.7
NC_007275:1:131261312613404279Pseudomonas syringae pv. phaseolicola 1448A small plasmid, completeprevent-host-death family protein3e-1477.4
NC_007492:5214709:523418552341855234508324Pseudomonas fluorescens PfO-1, complete genomePrevent-host-death protein3e-1373.9
NC_013364:2645438:266775726677572668008252Escherichia coli O111:H- str. 11128, complete genomeantitoxin of the YoeB-YefM toxin-antitoxin system4e-1373.6
NC_011146:2200142:222858522285852228836252Geobacter bemidjiensis Bem, complete genomeprevent-host-death family protein6e-1372.8
NC_012918:2668031:267375826737582674009252Geobacter sp. M21 chromosome, complete genomeprevent-host-death family protein2e-1270.9
NC_014935:1047411:106029210602921060546255Nitratifractor saLSUginis DSM 16511 chromosome, complete genomeprevent-host-death family protein3e-1270.5
NC_002758:2515310:253728625372862537537252Staphylococcus aureus subsp. aureus Mu50, complete genomehypothetical protein1e-1168.6
NC_007795:2455468:247744724774472477698252Staphylococcus aureus subsp. aureus NCTC 8325, complete genomehypothetical protein1e-1168.6
NC_002951:2448000:246678224667822467033252Staphylococcus aureus subsp. aureus COL, complete genomeaddiction module antitoxin, Axe family1e-1168.6
NC_007622:2399347:241908424190842419335252Staphylococcus aureus RF122, complete genomehypothetical protein1e-1168.6
NC_009632:2545419:256734625673462567597252Staphylococcus aureus subsp. aureus JH1 chromosome, completeprevent-host-death family protein1e-1168.6
NC_016928:2411486:243119524311952431446252Staphylococcus aureus subsp. aureus M013 chromosome, completehypothetical protein1e-1168.6
NC_017338:2456000:247530024753002475551252Staphylococcus aureus subsp. aureus JKD6159 chromosome, completeaddiction module antitoxin, Axe family1e-1168.6
NC_017343:2367177:238915323891532389404252Staphylococcus aureus subsp. aureus ECT-R 2, complete genomeprevent-host-death family protein1e-1168.6
NC_017347:2511783:253133025313302531581252Staphylococcus aureus subsp. aureus T0131 chromosome, completePrevent-host-death family protein1e-1168.6
NC_017351:2489460:250960325096032509854252Staphylococcus aureus subsp. aureus 11819-97 chromosome, completeantitoxin YefM1e-1168.6
NC_002952:2550500:257143225714322571683252Staphylococcus aureus subsp. aureus MRSA252, complete genomehypothetical protein1e-1168.6
NC_013416:1621469:164797116479711648222252Aggregatibacter actinomycetemcomitans D11S-1, complete genomePrevent-host-death protein1e-1065.1
NC_016513:1958500:198591119859111986162252Aggregatibacter actinomycetemcomitans ANH9381 chromosome, completeprevent-host-death protein1e-1065.1
NC_002937:1764117:181041718104171810656240Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, completeprevent-host-death family protein2e-1064.7
NC_014228:3591758:360711136071113607365255Xenorhabdus nematophila ATCC 19061, complete genomeAntitoxin yefM4e-1063.5
NC_016941:2395502:241584624158462416097252Staphylococcus aureus subsp. aureus MSHR1132, complete genomehypothetical protein6e-1062.8
NC_013194:3861409:386805138680513868302252Candidatus Accumulibacter phosphatis clade IIA str. UW-1, completeprevent-host-death family protein6e-1062.8
NC_015164:2078500:208490820849082085222315Bacteroides salanitronis DSM 18170 chromosome, complete genomeprevent-host-death family protein2e-0961.2
NC_008789:835909:876172876172876423252Halorhodospira halophila SL1, complete genomeprevent-host-death family protein2e-0960.8
NC_017045:1:260742607426328255Riemerella anatipestifer ATCC 11845 = DSM 15868 chromosome,prevent-host-death family protein9e-0958.9
NC_020125:1802000:181682018168201817074255Riemerella anatipestifer RA-CH-2, complete genomehypothetical protein9e-0958.9
NC_014738:2011554:202083020208302021084255Riemerella anatipestifer ATCC 11845 = DSM 15868 chromosome,prevent-host-death family protein9e-0958.9
NC_012108:4907430:491975949197594919974216Desulfobacterium autotrophicum HRM2, complete genomehypothetical protein7e-0855.8
NC_008789:472500:474613474613474876264Halorhodospira halophila SL1, complete genomeprevent-host-death family protein4e-0753.5
NC_009930:152500:167274167274167567294Acaryochloris marina MBIC11017 plasmid pREB5, complete sequenceaddiction module antitoxin, Axe family protein4e-0650.1