Pre_GI: BLASTP Hits

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Query: NC_004603:1897532:1922975 Vibrio parahaemolyticus RIMD 2210633 chromosome I, complete

Start: 1922975, End: 1923247, Length: 273

Host Lineage: Vibrio parahaemolyticus; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This is a clinical strain isolated in 1996 in Osaka, Japan. It contains a type III secretion system which may enable colonization and penetration of the host intestinal epithelial layer, and possibly lead to septicemia. The genome contains multipe chromosomal rearrangements as compared to Vibrio cholerae. The organism also produces a hemolysin (thermostable direct hemolysin - TDH) that is particular to Vibrio parahaemolyticus. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. This species causes food poisoning (gastroenteritis) in countries that have elevated levels of seafood consumption such as Japan.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_005139:1784000:183406918340691834341273Vibrio vulnificus YJ016 chromosome I, complete sequencehypothetical protein3e-47186
NC_006513:881120:910490910490910822333Azoarcus sp. EbN1, complete genomehypothetical protein1e-32138
NC_008609:2643000:264663226466322646892261Pelobacter propionicus DSM 2379, complete genomeaddiction module toxin, Txe/YoeB family9e-32135
NC_016513:1958500:198615919861591986413255Aggregatibacter actinomycetemcomitans ANH9381 chromosome, completetoxin1e-30131
NC_013416:1621469:164821916482191648473255Aggregatibacter actinomycetemcomitans D11S-1, complete genometoxin2e-30130
NC_010529:23775:459894598946258270Cupriavidus taiwanensis plasmid pRALTA, complete sequencetoxin of the YoeB-YefM toxin-antitoxin system6e-30129
NC_007777:3000941:301816530181653018425261Frankia sp. CcI3, complete genomeAddiction module toxin, Txe/YoeB2e-28124
NC_013364:2645438:266750626675062667760255Escherichia coli O111:H- str. 11128, complete genometoxin of the YoeB-YefM toxin-antitoxin system2e-28124
NC_014228:3591758:360736236073623607616255Xenorhabdus nematophila ATCC 19061, complete genomeToxin yoeB4e-28123
NC_014218:534986:548946548946549215270Arcanobacterium haemolyticum DSM 20595 chromosome, complete genomeaddiction module toxin, Txe/YoeB family4e-27119
NC_017045:1:263282632826585258Riemerella anatipestifer ATCC 11845 = DSM 15868 chromosome,addiction module toxin, txe/yoeb family2e-26117
NC_014738:2011554:202108420210842021341258Riemerella anatipestifer ATCC 11845 = DSM 15868 chromosome,addiction module toxin, txe/yoeb family2e-26117
NC_020125:1802000:181656318165631816820258Riemerella anatipestifer RA-CH-2, complete genomehypothetical protein2e-26117
NC_015125:3284095:329888032988803299146267Microbacterium testaceum StLB037, complete genomehypothetical protein1e-25115
NC_014355:2321957:232471523247152324969255Candidatus Nitrospira defluvii, complete genomeaddiction module toxin YoeB6e-26115
NC_008789:835909:875921875921876175255Halorhodospira halophila SL1, complete genomeaddiction module toxin, Txe/YoeB family6e-26115
NC_007492:5214709:523450552345055234759255Pseudomonas fluorescens PfO-1, complete genomeAddiction module toxin, Txe/YoeB4e-25113
NC_011146:2200142:222833422283342228588255Geobacter bemidjiensis Bem, complete genomeaddiction module toxin, Txe/YoeB family6e-25112
NC_013194:3861409:386829938682993868553255Candidatus Accumulibacter phosphatis clade IIA str. UW-1, completeaddiction module toxin, Txe/YoeB family8e-25112
NC_014935:1047411:106054310605431060806264Nitratifractor saLSUginis DSM 16511 chromosome, complete genomeaddiction module toxin, txe/yoeb family1e-23108
NC_012918:2668031:267400626740062674260255Geobacter sp. M21 chromosome, complete genomeTxe/YoeB family addiction module toxin3e-23107
NC_016109:4088259:409814640981464098412267Kitasatospora setae KM-6054, complete genomeputative toxin7e-23105
NC_013192:63111:854858548585748264Leptotrichia buccalis DSM 1135, complete genomeaddiction module toxin, Txe/YoeB family4e-2199.8
NC_016941:2395502:241558024155802415846267Staphylococcus aureus subsp. aureus MSHR1132, complete genomeAddiction module toxin Txe/YoeB family protein6e-2199.4
NC_007275:1:133761337613678303Pseudomonas syringae pv. phaseolicola 1448A small plasmid, completeaddiction module toxin Txe1e-2098.6
NC_002951:2448000:246651624665162466782267Staphylococcus aureus subsp. aureus COL, complete genomeaddiction module toxin, Txe/YoeB family1e-2098.6
NC_007795:2455468:247718124771812477447267Staphylococcus aureus subsp. aureus NCTC 8325, complete genomehypothetical protein1e-2098.6
NC_009641:2513300:253501325350132535279267Staphylococcus aureus subsp. aureus str. Newman chromosome,addiction module toxin Txe/YoeB family protein1e-2098.6
NC_015703:4655488:466917546691754669432258Runella slithyformis DSM 19594 chromosome, complete genomeTxe/YoeB family addiction module toxin1e-2098.6
NC_002952:2550500:257116625711662571432267Staphylococcus aureus subsp. aureus MRSA252, complete genomehypothetical protein2e-2097.8
NC_002758:2515310:253702025370202537286267Staphylococcus aureus subsp. aureus Mu50, complete genomehypothetical protein3e-2097.4
NC_017338:2456000:247503424750342475300267Staphylococcus aureus subsp. aureus JKD6159 chromosome, completeaddiction module toxin Txe/YoeB family protein4e-2096.7
NC_007622:2399347:241881824188182419084267Staphylococcus aureus RF122, complete genomehypothetical protein4e-2096.7
NC_012803:1753138:175604417560441756298255Micrococcus luteus NCTC 2665, complete genometoxin-antitoxin system, toxin component, Txe/YoeB family5e-1993.2
NC_017068:2827568:285087428508742851149276Selenomonas ruminantium subsp. lactilytica TAM6421, completeputative addiction module toxin6e-1786.3
NC_018604:1292889:129953012995301299793264Brachyspira pilosicoli WesB complete genomeplasmid encoded toxin6e-1785.9
NC_015723:1347946:135113913511391351339201Cupriavidus necator N-1 chromosome 2, complete sequencehypothetical protein3e-1684
NC_015164:2078500:208464520846452084920276Bacteroides salanitronis DSM 18170 chromosome, complete genomeaddiction module toxin, Txe/YoeB family2e-1580.9
NC_008789:472500:474873474873475133261Halorhodospira halophila SL1, complete genomeaddiction module toxin, Txe/YoeB family3e-1580.9
NC_009632:2545419:256707925670792567270192Staphylococcus aureus subsp. aureus JH1 chromosome, completeaddiction module antitoxin1e-1478.6
NC_017343:2367177:238888723888872389078192Staphylococcus aureus subsp. aureus ECT-R 2, complete genomehypothetical protein1e-1478.6
NC_017347:2511783:253106425310642531255192Staphylococcus aureus subsp. aureus T0131 chromosome, completeAddiction module antitoxin1e-1478.6
NC_017351:2489460:250933725093372509528192Staphylococcus aureus subsp. aureus 11819-97 chromosome, completehypothetical protein1e-1478.6
NC_013173:2884887:289322428932242893493270Desulfomicrobium baculatum DSM 4028, complete genomeaddiction module toxin, Txe/YoeB family2e-1477.4
NC_016928:2411486:243092924309292431120192Staphylococcus aureus subsp. aureus M013 chromosome, completehypothetical protein4e-1476.6
NC_009930:152500:167551167551167844294Acaryochloris marina MBIC11017 plasmid pREB5, complete sequenceaddiction module toxin, Txe/YoeB family protein1e-1375.1
NC_013173:2884887:289587728958772896122246Desulfomicrobium baculatum DSM 4028, complete genomeaddiction module toxin, Txe/YoeB family3e-1167.4
NC_019940:2432689:244316824431682443443276Thioflavicoccus mobilis 8321 chromosome, complete genometoxin-antitoxin system, toxin component, Txe/YoeB family1e-1065.5
NC_013960:1258000:126741312674131267682270Nitrosococcus halophilus Nc4 chromosome, complete genomeaddiction module toxin, Txe/YoeB family2e-1064.3
NC_007973:1785985:179465117946511794761111Ralstonia metallidurans CH34 chromosome 1, complete sequenceAddiction module toxin, Txe/YoeB9e-0855.5
NC_015499:1790186:179421417942141794438225Thermodesulfobium narugense DSM 14796 chromosome, complete genome6e-0753.1