Pre_GI: BLASTP Hits

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Query: NC_004603:1897532:1907817 Vibrio parahaemolyticus RIMD 2210633 chromosome I, complete

Start: 1907817, End: 1908176, Length: 360

Host Lineage: Vibrio parahaemolyticus; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This is a clinical strain isolated in 1996 in Osaka, Japan. It contains a type III secretion system which may enable colonization and penetration of the host intestinal epithelial layer, and possibly lead to septicemia. The genome contains multipe chromosomal rearrangements as compared to Vibrio cholerae. The organism also produces a hemolysin (thermostable direct hemolysin - TDH) that is particular to Vibrio parahaemolyticus. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. This species causes food poisoning (gastroenteritis) in countries that have elevated levels of seafood consumption such as Japan.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014965:1428902:153191115319111532270360Vibrio vulnificus MO6-24/O chromosome I, complete sequenceglyoxalase family protein1e-54211
NC_016945:370471:382605382605382964360Vibrio cholerae IEC224 chromosome II, complete sequencehypothetical protein4e-54209
NC_002506:370629:382786382786383145360Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, completehypothetical protein4e-54209
NC_002506:324552:337188337188337547360Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, completehypothetical protein2e-53207
NC_012667:931390:102417510241751024534360Vibrio cholerae MJ-1236 chromosome 2, complete genomeglyoxalase family protein2e-53207
NC_016446:49618:622536225362612360Vibrio cholerae O1 str. 2010EL-1786 chromosome 2, completehypothetical protein2e-53207
NC_016945:324519:337156337156337515360Vibrio cholerae IEC224 chromosome II, complete sequencehypothetical protein2e-53207
NC_004459:2443000:251653925165392516898360Vibrio vulnificus CMCP6 chromosome I, complete sequencePredicted enzyme related to lactoylglutathione lyase1e-53207
NC_012583:361241:380481380481380840360Vibrio cholerae O395 chromosome chromosome II, complete sequenceGlyoxalase/bleomycin resistance protein2e-53206
NC_012580:353273:365778365778366137360Vibrio cholerae M66-2 chromosome II, complete sequenceGlyoxalase/bleomycin resistance protein2e-53206
NC_012580:301500:313730313730314089360Vibrio cholerae M66-2 chromosome II, complete sequenceGlyoxalase/bleomycin resistance protein2e-53206
NC_009456:787322:883102883102883461360Vibrio cholerae O395 chromosome 1, complete sequencehypothetical protein2e-53206
NC_012660:3744868:374804237480423748398357Pseudomonas fluorescens SBW25 chromosome, complete genomehypothetical protein8e-2095.5
NC_011992:1318691:134099313409931341388396Acidovorax ebreus TPSY, complete genomeGlyoxalase/bleomycin resistance protein/dioxygenase1e-0652