Pre_GI: BLASTP Hits

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Query: NC_004578:934867:937527 Pseudomonas syringae pv. tomato str. DC3000, complete genome

Start: 937527, End: 937892, Length: 366

Host Lineage: Pseudomonas syringae group genomosp. 3; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: While pathogenic on Arabidopsis thaliana, it is mainly characterized as causing bacterial speck disease on tomato plants, which has a large economic impact. This organism is mainly endophytic and is a poor colonizes of plant surfaces but can multiply within the host. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This species includes many plant pathogens of important crops, which makes it a model organism in plant pathology. Its natural environment is on the surface of plant leaves and it can withstand various stressful conditions, like rain, wind, UV radiation and drought. It can colonize plants in a non-pathogenic state and can rapidly take advantage of changing environmental conditions to induce disease in susceptible plants by shifting gene expression patterns.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007005:1636875:163687516368751637267393Pseudomonas syringae pv. syringae B728a, complete genomehypothetical protein6e-44175
NC_021150:3667176:368784536878453688237393Azotobacter vinelandii CA6, complete genomehypothetical protein3e-23107
NC_012560:3667177:368784636878463688238393Azotobacter vinelandii DJ, complete genomehypothetical protein3e-23107
NC_009656:4527457:463746846374684637854387Pseudomonas aeruginosa PA7 chromosome, complete genomehypothetical protein3e-22103
NC_008463:5313527:533322153332215333607387Pseudomonas aeruginosa UCBPP-PA14, complete genomehypothetical protein4e-22103
NC_018080:5091772:516247951624795162865387Pseudomonas aeruginosa DK2 chromosome, complete genomehypothetical protein2e-21101
NC_011992:1213726:123201612320161232426411Acidovorax ebreus TPSY, complete genomehypothetical protein2e-1787.8
NC_010170:1498253:153837215383721538782411Bordetella petrii, complete genomehypothetical protein2e-1787.4
NC_015379:2417312:244600024460002446395396Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,hypothetical protein3e-1787.4
NC_009138:1974935:202302920230292023439411Herminiimonas arsenicoxydans, complete genomehypothetical protein3e-1787.4
NC_012691:2614603:266346126634612663859399Tolumonas auensis DSM 9187, complete genomehypothetical protein3e-1683.6
NC_006513:1379735:144193814419381442363426Azoarcus sp. EbN1, complete genomehypothetical protein4e-1683.2
NC_012912:483390:507769507769508167399Dickeya zeae Ech1591, complete genomehypothetical protein6e-1682.8
NC_003919:2639080:265571426557142656127414Xanthomonas axonopodis pv. citri str. 306, complete genomehypothetical protein1e-1582
NC_008344:49039:908089080891206399Nitrosomonas eutropha C91, complete genomehypothetical protein4e-1580.1
NC_011901:2983555:299465529946552995053399Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, completehypothetical protein6e-1579.7
NC_015422:1876102:189698918969891897399411Alicycliphilus denitrificans K601 chromosome, complete genomeconjugative transfer region protein1e-1479
NC_011662:1041725:104474810447481045158411Thauera sp. MZ1T, complete genomehypothetical protein3e-1477
NC_011662:1017933:104474810447481045158411Thauera sp. MZ1T, complete genomehypothetical protein3e-1477
NC_016830:3869572:391578539157853916198414Pseudomonas fluorescens F113 chromosome, complete genomehypothetical protein4e-1476.6
NC_015726:2862500:288482828848282885277450Cupriavidus necator N-1 chromosome 1, complete sequencehypothetical protein5e-1476.3
NC_012660:2045398:210808321080832108496414Pseudomonas fluorescens SBW25 chromosome, complete genomehypothetical protein5e-1373.2
NC_013716:3512950:353706335370633537416354Citrobacter rodentium ICC168, complete genomehypothetical protein3e-0857.4
NC_009832:4521585:454975545497554550120366Serratia proteamaculans 568, complete genomehypothetical protein4e-0650.1
NC_014029:331919:366936366936367301366Yersinia pestis Z176003 chromosome, complete genomehypothetical protein4e-0650.1
NC_015566:316340:336551336551336916366Serratia sp. AS12 chromosome, complete genomehypothetical protein4e-0650.1
NC_010554:2789722:282109128210912821507417Proteus mirabilis HI4320, complete genomehypothetical protein9e-0648.9