Pre_GI: BLASTP Hits

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Query: NC_004578:895019:895019 Pseudomonas syringae pv. tomato str. DC3000, complete genome

Start: 895019, End: 895747, Length: 729

Host Lineage: Pseudomonas syringae group genomosp. 3; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: While pathogenic on Arabidopsis thaliana, it is mainly characterized as causing bacterial speck disease on tomato plants, which has a large economic impact. This organism is mainly endophytic and is a poor colonizes of plant surfaces but can multiply within the host. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This species includes many plant pathogens of important crops, which makes it a model organism in plant pathology. Its natural environment is on the surface of plant leaves and it can withstand various stressful conditions, like rain, wind, UV radiation and drought. It can colonize plants in a non-pathogenic state and can rapidly take advantage of changing environmental conditions to induce disease in susceptible plants by shifting gene expression patterns.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007005:830467:831426831426832154729Pseudomonas syringae pv. syringae B728a, complete genomeProtein of unknown function DUF1525e-114410
NC_005773:866157:867116867116867844729Pseudomonas syringae pv. phaseolicola 1448A, complete genomeconserved hypothetical protein TIGR007261e-113409
NC_015410:1144272:116317211631721163903732Pseudomonas mendocina NK-01 chromosome, complete genomehypothetical protein1e-86319
NC_018080:5192264:519153951915395192267729Pseudomonas aeruginosa DK2 chromosome, complete genomemulticopper polyphenol oxidase2e-86318
NC_009439:1075170:109534010953401096071732Pseudomonas mendocina ymp, complete genomehypothetical protein1e-84313
NC_015556:4118304:411756741175674118307741Pseudomonas fulva 12-X chromosome, complete genomeMulti-copper polyphenol oxidoreductase, laccase2e-83308
NC_003198:2703013:272069927206992721430732Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein4e-59228
NC_011080:2789744:280734428073442808075732Salmonella enterica subsp. enterica serovar Newport str. SL254,hypothetical protein8e-59226
NC_011149:2701916:271825427182542718985732Salmonella enterica subsp. enterica serovar Agona str. SL483,conserved hypothetical protein TIGR007268e-59226
NC_006905:2805877:282205628220562822787732Salmonella enterica subsp. enterica serovar Choleraesuis strputative inner membrane protein2e-58225
NC_016002:1975000:202166120216612022404744Pseudogulbenkiania sp. NH8B, complete genomeCu-oxidase 4 family protein2e-58225
NC_010995:3821327:382213338221333822900768Cellvibrio japonicus Ueda107, complete genomeYfiH3e-57221
CU928160:2785792:280136928013692802100732Escherichia coli IAI1 chromosome, complete genomeconserved hypothetical protein4e-57221
CP002185:2889656:290523529052352905966732Escherichia coli W, complete genomeconserved protein6e-56217
CP002516:1196000:119989111998911200622732Escherichia coli KO11, complete genomeprotein of unknown function DUF1526e-56217
NC_009648:3192483:320758632075863208317732Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomehypothetical protein2e-53209
NC_013850:1198134:120200212020021202733732Klebsiella variicola At-22 chromosome, complete genomeprotein of unknown function DUF1526e-53207
NC_008702:1094663:109570010957001096395696Azoarcus sp. BH72, complete genomeconserved hypothetical protein4e-53207
NC_007298:1721425:172237417223741723111738Dechloromonas aromatica RCB, complete genomeProtein of unknown function DUF1523e-52205
NC_007645:6049340:604934060493406050119780Hahella chejuensis KCTC 2396, complete genomehypothetical protein5e-51201
NC_008740:979830:9993589993581000056699Marinobacter aquaeolei VT8, complete genomeprotein of unknown function DUF1523e-50198
NC_017505:721395:741379741379742158780Neisseria meningitidis alpha710 chromosome, complete genomehypothetical protein1e-47189
NC_017501:1633436:163496716349671635746780Neisseria meningitidis 8013, complete genomehypothetical protein1e-47189
NC_011184:597496:601447601447602181735Vibrio fischeri MJ11 chromosome I, complete sequencehypothetical protein3e-47188
NC_013016:633313:649985649985650764780Neisseria meningitidis alpha14 chromosome, complete genomehypothetical protein8e-45180
NC_010120:662969:679903679903680682780Neisseria meningitidis 053442, complete genomeconserved hypothetical protein7e-45180
NC_003112:719490:738455738455739234780Neisseria meningitidis MC58, complete genomehypothetical protein7e-45180
NC_017517:749031:769834769834770613780Neisseria meningitidis M01-240355 chromosome, complete genomehypothetical protein3e-44178
NC_017518:795113:815097815097815876780Neisseria meningitidis NZ-05/33 chromosome, complete genomehypothetical protein5e-44177
NC_017512:642229:658220658220658999780Neisseria meningitidis WUE 2594, complete genomehypothetical protein8e-44177
NC_003116:867943:887369887369888148780Neisseria meningitidis Z2491, complete genomehypothetical protein8e-44177
NC_013166:1149760:114976011497601150485726Kangiella koreensis DSM 16069, complete genomeprotein of unknown function DUF1521e-42172
NC_008260:497855:518410518410519156747Alcanivorax borkumensis SK2, complete genomehypothetical protein7e-39160
NC_008786:4216152:421812442181244218963840Verminephrobacter eiseniae EF01-2, complete genomeprotein of unknown function DUF1522e-33142
NC_014221:2188250:219111121911112191860750Truepera radiovictrix DSM 17093 chromosome, complete genomeprotein of unknown function DUF1522e-21102
NC_009484:464342:478954478954479697744Acidiphilium cryptum JF-5 chromosome, complete genomehypothetical protein8e-1994
NC_015186:573289:587901587901588644744Acidiphilium multivorum AIU301, complete genomehypothetical protein1e-1893.6
NC_015565:2408669:242444824244482425263816Desulfotomaculum carboxydivorans CO-1-SRB chromosome, completemulti-copper polyphenol oxidoreductase, laccase6e-1890.9
NC_017219:391100:408049408049409029981Bifidobacterium longum subsp. infantis ATCC 15697, complete genomehypothetical protein4e-1581.6
NC_011593:391297:408255408255409235981Bifidobacterium longum subsp. infantis ATCC 15697 chromosome,hypothetical protein4e-1581.6
NC_014220:837926:847844847844848665822Syntrophothermus lipocalidus DSM 12680 chromosome, complete genomeprotein of unknown function DUF1522e-1479.7
NC_010814:294394:309880309880310683804Geobacter lovleyi SZ, complete genomeprotein of unknown function DUF1527e-1477.4
NC_013520:1638000:165060416506041651458855Veillonella parvula DSM 2008, complete genomeprotein of unknown function DUF1522e-1375.9
NC_012108:2037429:203985820398582040646789Desulfobacterium autotrophicum HRM2, complete genomehypothetical protein1e-1273.9
NC_015580:141379:144047144047144823777Novosphingobium sp. PP1Y, complete genomehypothetical protein2e-1272.8
NC_013385:1007616:102652310265231027284762Ammonifex degensii KC4, complete genomeprotein of unknown function DUF1523e-1272
NC_014960:2059012:207712420771242077912789Anaerolinea thermophila UNI-1, complete genomehypothetical protein2e-1169.7
NC_009802:1525144:156325015632501563969720Campylobacter concisus 13826, complete genomehypothetical protein4e-1168.6
NC_014410:2511753:251726525172652518080816Thermoanaerobacterium thermosaccharolyticum DSM 571 chromosome,protein of unknown function DUF1523e-1065.5
NC_014935:918855:931399931399932160762Nitratifractor saLSUginis DSM 16511 chromosome, complete genomehypothetical protein1e-0963.5
NC_017047:3212000:321730632173063218007702Rahnella aquatilis HX2 chromosome, complete genomehypothetical protein2e-0963.2
NC_015061:3147691:315270431527043153405702Rahnella sp. Y9602 chromosome, complete genomehypothetical protein2e-0963.2
NC_009718:203998:216471216471217271801Fervidobacterium nodosum Rt17-B1, complete genomehypothetical protein2e-0962.4
NC_008609:251608:278079278079278876798Pelobacter propionicus DSM 2379, complete genomeprotein of unknown function DUF1525e-0961.2
NC_020064:2779864:277986427798642780577714Serratia marcescens FGI94, complete genomehypothetical protein7e-0960.8
NC_015593:2447844:245973224597322460493762Sphingobium chlorophenolicum L-1 chromosome chromosome 1, completeMulti-copper polyphenol oxidoreductase laccase2e-0859.7
NC_014006:63000:739887398874749762Sphingobium japonicum UT26S chromosome 1, complete genomehypothetical protein2e-0859.7
NC_016818:3148000:315324031532403153941702Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completehypothetical protein2e-0859.3
NC_004722:3855326:388137038813703882188819Bacillus cereus ATCC 14579, complete genomehypothetical Cytosolic Protein9e-0857.4
NC_014335:3645500:366995836699583670815858Bacillus cereus biovar anthracis str. CI chromosome, completehypothetical protein1e-0757
NC_007530:3694940:371933537193353720153819Bacillus anthracis str. 'Ames Ancestor', complete genomeconserved hypothetical protein tigr007261e-0757
NC_011772:3863166:388949638894963890314819Bacillus cereus G9842, complete genomehypothetical protein TIGR007261e-0757
NC_011725:3897450:392342239234223924240819Bacillus cereus B4264 chromosome, complete genomehypothetical protein1e-0757
NC_014171:3779956:380424138042413805059819Bacillus thuringiensis BMB171 chromosome, complete genomehypothetical protein1e-0757
NC_011773:3729500:375399437539943754812819Bacillus cereus AH820 chromosome, complete genomehypothetical protein1e-0756.6
NC_006274:3773335:379964337996433800461819Bacillus cereus E33L, complete genomehypothetical protein1e-0756.6
NC_005957:3716487:374140237414023742220819Bacillus thuringiensis serovar konkukian str. 97-27, completehypothetical protein1e-0756.6
NC_011999:813978:818820818820819749930Macrococcus caseolyticus JCSC5402, complete genomehypothetical protein3e-0755.5
NC_013595:4796436:481280048128004813540741Streptosporangium roseum DSM 43021, complete genomehypothetical protein2e-0653.1
NC_008800:1942000:195682819568281957547720Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,hypothetical protein2e-0652.8